Transcript Information: R_Transcript_353625.p1


Annotated TAIR IDAT2G36710.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15389614-15391200 | Reverse length=407
E-Value5.4E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34767544675655
Replicate 20.26661968782601
Replicate 30.29087920757019
Condition 2: 8 Hour
Replicate 10.077732904594429
Replicate 20.21296077943986
Replicate 30.51861744629677
Condition 3: 24 Hour
Replicate 10.72881927706997
Replicate 20.35008347445361
Replicate 30.069484776783801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_353625.p1 GENE.R_Transcript_353625~~R_Transcript_353625.p1 ORF type:5prime_partial len:315 (+),score=48.86,Pectinesterase|PF01095.15|3.4e-68 R_Transcript_353625:2-946(+)
GGATGTGGCAACTTTACAAGTCTTCAAAAAGCCATTGACGCAGTGCCTGATTATAGCTCGTCTTCCACCCTTATCATCGTAGATTCTGGCCAATACAGGGAGAAGGTGATGATTAGTGCAAGCAAAGTGAATTTGATAATTCAAGGACAAGGATACCAAAATACGATCATCTCATGGAATGATACTTCAAGTTCTACAGGAGGGACAGCTTACAGCGCCTCTTTTACCATTAATGCACCCGGTTTTGCTGCTTACAATATTAGCTTTCAGAATACAGCTCCTCAGCCATCTCCAGGAGACGTTGGGGCGCAAGCAGTGGCATTAAGGATATCAAGTGATCAAGCTGCATTTTATGGTTGTGGATTTTACGGGGCTCGGGACACTCTTAATGATGATCGTGGGAGACATTACTTCAAGGAGTGTTTCATTCAAGGCTCTATTGATTTCATCTTTGGAGTTGCTAGATCCCTCTATGAGGATTGCACCATAAATTCAATAGCTAAGGATGTTGGGAGTGGGGTGAGTGGATCAATAACAGCACATGGTAGGCAGTCAAACGAGGAGAAAACAGGCTTCTCATTTGTGAATTGCAAGATTATTGGTAGTGAAAATGGTAAAATTTGGCTTGGCAGGGCTTGGGGACCTTATGCCACCGTCGTATTTTCTAAGACATACATGTCTGAAGTCGTTTCTCCTGATGCCTGGAATGACTGGGGTGACTCCTCTAGAGACTCAACTGTCTTCTTTGGAGAGTATAGTTGCACTGGTCCAGGGGCAAACACAGCGAATAGGGTTTCGTATAGCAAGCAACTAAAGCAATATGAAGCTGCCCCTTATCTTAATTGCTCCTACATTGACGGAAATGATTGGCTTCTTCCTCGTCAAACTCTTTCATTGCCCTCCATTGACACCATGGAACAAGATAAATTTTTCCATAGTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_353625.p1 GENE.R_Transcript_353625~~R_Transcript_353625.p1 ORF type:5prime_partial len:315 (+),score=48.86,Pectinesterase|PF01095.15|3.4e-68 R_Transcript_353625:2-946(+)
GCGNFTSLQKAIDAVPDYSSSSTLIIVDSGQYREKVMISASKVNLIIQGQGYQNTIISWNDTSSSTGGTAYSASFTINAPGFAAYNISFQNTAPQPSPGDVGAQAVALRISSDQAAFYGCGFYGARDTLNDDRGRHYFKECFIQGSIDFIFGVARSLYEDCTINSIAKDVGSGVSGSITAHGRQSNEEKTGFSFVNCKIIGSENGKIWLGRAWGPYATVVFSKTYMSEVVSPDAWNDWGDSSRDSTVFFGEYSCTGPGANTANRVSYSKQLKQYEAAPYLNCSYIDGNDWLLPRQTLSLPSIDTMEQDKFFHSF*

Click here to download the sequence:
Link to NCBI Protein BLAST