Transcript Information: R_Transcript_35395.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value8E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49111105707763
Replicate 20.517845974393
Replicate 30.56496438017416
Condition 2: 8 Hour
Replicate 10.4392083398609
Replicate 20.40109205096297
Replicate 31.0174669630262
Condition 3: 24 Hour
Replicate 10.20589961639196
Replicate 20.59341503741464
Replicate 30.83428470779653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35395.p1 GENE.R_Transcript_35395~~R_Transcript_35395.p1 ORF type:complete len:446 (+),score=66.64,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|9.2e-15,RVT_1|PF00078.23|5.7e-09 R_Transcript_35395:398-1735(+)
ATGTGTAGGGATGCTGATTTGAATTTCCATCCTAAGTGTAGCAGGCAACAACTTACTCACCTTCTTTTTGCTGATGACTTAATGATGTTTTCAAGAGGTGATCAAGTCTCTATTCAGCTGCTACACAGTGCATTTGAGAAATTTTCTAAAGCTTCAGGGCTAAAAGCTAATATGAGTAAGAGCTCCCTCTTCTGTGGGGGGATGCAAAAGAGTGACGAGGTGAACATGCTAAAGTATTTGAACTTGCAAGAAGGAAGACTTCCTATTAGGTACCTGGGGGTGCCCCTAGCCCACAAGAAACTATCCATAAGTGAATGCATCCCATTGGTGGACAGAATCACCTCTAGAATCACTACTTGGACTGCCAAGTTCTTGTCATATGTTGGAAGAGTACAGTTGGTTCAATCTGTATTGTTTGGCATTCAAGCCTATTGGGCTCAGATTATCATCACCCCCAAGAAGATGCTGAAGAGAGTGGAGGCTTTATGTAGAAGTTTTATATGGACTGGCAATGCTGTGATTTCTAAGAAGGCACTAGTTGCTTGGGATAAGGTGACCAATCCCAAGAAAAGTGGAGGGTTAGGTTTGAAAAAATTGGTGATCTGGAATAGAGCTGCTATCTGTAAGCTTTGTTGGGAGTACACAAATAAGAAAGATAAAGTTTGGATCAAATGGATGCATGAGTATTATCCTGTCTTGGCAAATGATAGAAGTATTCCCCTAAATATGTCCTGGATGCTCAGGAAGATAGTTCAATTGAGGCAGGAAGATAGAGCACTGAATATAAATGCTCATGATAAAGTAACAATTGGCAGCATTTATAATCAGTTCATTGAGGAGGTCCCAGCAGTCAATTGGCATAAGCTAGTATGGAAAAATCTTGCAAGGCCCAGAGCTAAACTGATCTGGTGGTTAGTTTTACTTCAGAAACTAATGACTAAGGATAAGGTCAAGAAGTGGAGCCCCAATTGTGACACTTTGTGTATTCTATGCAAACAAGAGGAGGAAACCTGTGAACATCTGTTTGGGACATGCTGTGTTAGTCAAGAGATCTTCACTAAGCTATTAAAAAATATTAAAGTAAGGTGGCATCCTACTACTACTTGGCAACACACTGTGGAGGAATGGCTGAGAATAGGATCTGGTAGAAGACCTGCTGCTCAGTGTGCTAGAGGCTTACTGGCTGAGGCATGCTATGCCATCTGGAGAGAAAGAAACCTCTGGGTCTTCCAACAACAAGAAAGGACAATAGAGCAAATCACTAAGAGTGTAATGCTTTTAGTCTGTGTCAAGGCTCAAACCACGGAGAAAGTTGCTAAATTTCTTGATAGCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35395.p1 GENE.R_Transcript_35395~~R_Transcript_35395.p1 ORF type:complete len:446 (+),score=66.64,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|9.2e-15,RVT_1|PF00078.23|5.7e-09 R_Transcript_35395:398-1735(+)
MCRDADLNFHPKCSRQQLTHLLFADDLMMFSRGDQVSIQLLHSAFEKFSKASGLKANMSKSSLFCGGMQKSDEVNMLKYLNLQEGRLPIRYLGVPLAHKKLSISECIPLVDRITSRITTWTAKFLSYVGRVQLVQSVLFGIQAYWAQIIITPKKMLKRVEALCRSFIWTGNAVISKKALVAWDKVTNPKKSGGLGLKKLVIWNRAAICKLCWEYTNKKDKVWIKWMHEYYPVLANDRSIPLNMSWMLRKIVQLRQEDRALNINAHDKVTIGSIYNQFIEEVPAVNWHKLVWKNLARPRAKLIWWLVLLQKLMTKDKVKKWSPNCDTLCILCKQEEETCEHLFGTCCVSQEIFTKLLKNIKVRWHPTTTWQHTVEEWLRIGSGRRPAAQCARGLLAEACYAIWRERNLWVFQQQERTIEQITKSVMLLVCVKAQTTEKVAKFLDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST