Transcript Information: R_Transcript_354250.p1


Annotated TAIR IDAT1G60720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22357072-22357941 | Forward length=289
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24017053887788
Replicate 20.20720033305557
Replicate 30.52745777359561
Condition 2: 8 Hour
Replicate 10
Replicate 20.073555532372321
Replicate 30.1791277363854
Condition 3: 24 Hour
Replicate 10.075519102722711
Replicate 20.14510038743801
Replicate 30.14399805715064


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_354250.p1 GENE.R_Transcript_354250~~R_Transcript_354250.p1 ORF type:complete len:304 (+),score=39.21,zf-RVT|PF13966.2|1.2e+04,zf-RVT|PF13966.2|2.7e-16,zf-RVT|PF13966.2|1.7e+02 R_Transcript_354250:480-1391(+)
ATGGCTATTTGTAGGAATTTCTTGTGGAATGGTACTGATAGTTATCGAAGCCCCCCTCCAGTAGCTTGGGATTTTGTGTGCCAGAAGAAGAAGTATGGGGGACTTGGGATTAGAGACTGTTATGCTAGTAACATAGCTTCTTTGGGGAATTATGTTTGGGCCTTAGCAATGAAGGAGGACTCTTTGTGGGTCAAATGGGTGCATAATGTGTACATCCTACAGGGAGACTGGTGGCATCACCAGCCACCTAAAAGTGCTAGCTGGTCTTGGAGGTTTATATGCCAAGTCAGAGATACTCTACAACCAGGCTATAATGGAAGTTCCTGGATGGCTTCCACAAAAGGAGAATACAGCTATGCAAATGGATATGAATGGCTCATAGAGAAAAAGGATAGATTCCAATGGAATTATGTGGTGTGGAATAGATACAATATCCCTAAACATTCTTTCATTATGTGGATGTTTATGCTGGGTAAAGCTAAAACAAGATATAAACTGGTGAAGATGGGAATTTGTAGAGATGGCTCATGTCCACTTTGTGAAGATCAAGCAGAGACTATCAACCACTTATTTTTCTCCTGCACTTTTAGTAAGTCCCTGATCAACATGTTCTGCAGCAGATATGGAATTCCTTCCTCTGACTGGACGCTTTATACATTGCCTAAATGGATCAGGAGAAGAACCAACATCTCTAAGATATGCAAGAAGGTCATATATGCTGGTTTAGTGGGGGTGGTTTATGTAATTTGGAGAGCTCGAAACACAGCTGTTTGGGAGAAAATGGTTGTAACATCGATCAAAAGTTTCCAGGTCTTGCAAGTGCAGCTCAAGATCAGAACTCAAAATTGTTTGCCTGTAACAACTACTATGGGGGAAAGGGAGTGGGTTGCAAAGTTGTATTGCACTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_354250.p1 GENE.R_Transcript_354250~~R_Transcript_354250.p1 ORF type:complete len:304 (+),score=39.21,zf-RVT|PF13966.2|1.2e+04,zf-RVT|PF13966.2|2.7e-16,zf-RVT|PF13966.2|1.7e+02 R_Transcript_354250:480-1391(+)
MAICRNFLWNGTDSYRSPPPVAWDFVCQKKKYGGLGIRDCYASNIASLGNYVWALAMKEDSLWVKWVHNVYILQGDWWHHQPPKSASWSWRFICQVRDTLQPGYNGSSWMASTKGEYSYANGYEWLIEKKDRFQWNYVVWNRYNIPKHSFIMWMFMLGKAKTRYKLVKMGICRDGSCPLCEDQAETINHLFFSCTFSKSLINMFCSRYGIPSSDWTLYTLPKWIRRRTNISKICKKVIYAGLVGVVYVIWRARNTAVWEKMVVTSIKSFQVLQVQLKIRTQNCLPVTTTMGEREWVAKLYCTD*

Click here to download the sequence:
Link to NCBI Protein BLAST