Transcript Information: R_Transcript_354558.p1


Annotated TAIR IDAT4G02460.1
Annotated Gene NameDNA mismatch repair protein, putative
Annotated Gene Symbol(s)PMS1
Annotation TypeOrtholog
Chromosome Positionchr4:1076306-1080510 | Reverse length=923
E-Value3.5E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97349125091833
Replicate 20.13997533610865
Replicate 30.9162695038461
Condition 2: 8 Hour
Replicate 10
Replicate 20.29814509121581
Replicate 30.36303221240774
Condition 3: 24 Hour
Replicate 10.30610409636939
Replicate 20.44110517781155
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_354558.p1 GENE.R_Transcript_354558~~R_Transcript_354558.p1 ORF type:internal len:150 (+),score=16.22 R_Transcript_354558:2-448(+)
TTCCCTGACCTGCAGTCCCTTACCACATTTGGCTTCAGAGGAGAGGCACTCAGCTCCCTTTGTGCACTGGGGAATTTGACTGTGGAAACTAGGATGAAGAATGAGTCTGTTGGCACACACTTAACTTTTGACCATTCGGGTCTTTTAGTAGCTGAGAAGAAGACAGCGAGAAAAGTCGGCACCACTGTAACAGTCAAGAAACTGTTCTCGAACTTGCCAGTGCGGAGCAAAGAATTCAGGCGTAATACCCGCAAGGAATATGGGAGACTTATTTCTTTATTAAATGCCTATTCTCTCATTGCTAAAGGAGTTCAATTAGTGTGCACCAATAAGTCTGGGAAAAATCCAAGATTTGTGGTTCTAAAAACGCAAGGAAGTGGATCACTTAAAGATAACATCGTAGCTCTATTTGGCATGAACACTTTTACTTGCTTGGAGCCTCTGAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_354558.p1 GENE.R_Transcript_354558~~R_Transcript_354558.p1 ORF type:internal len:150 (+),score=16.22 R_Transcript_354558:2-448(+)
FPDLQSLTTFGFRGEALSSLCALGNLTVETRMKNESVGTHLTFDHSGLLVAEKKTARKVGTTVTVKKLFSNLPVRSKEFRRNTRKEYGRLISLLNAYSLIAKGVQLVCTNKSGKNPRFVVLKTQGSGSLKDNIVALFGMNTFTCLEPLS

Click here to download the sequence:
Link to NCBI Protein BLAST