Transcript Information: R_Transcript_35456.p1


Annotated TAIR IDAT5G24870.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8545008-8546923 | Reverse length=520
E-Value9.1E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.505921909437
Replicate 227.486065999517
Replicate 335.901105105243
Condition 2: 8 Hour
Replicate 125.732418071832
Replicate 233.622635059383
Replicate 332.804910830299
Condition 3: 24 Hour
Replicate 132.97575947252
Replicate 228.230731379939
Replicate 329.807074200884


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35456.p1 GENE.R_Transcript_35456~~R_Transcript_35456.p1 ORF type:complete len:550 (+),score=97.22,zf-RING_2|PF13639.2|1.3e-11,zf-rbx1|PF12678.3|2.5e-07,zf-RING_11|PF17123.1|2.2e-07,zf-RING_11|PF17123.1|1.1e+03,zf-C3HC4|PF00097.21|8.6e-06 R_Transcript_35456:561-2210(+)
ATGGATGAATATTCCAGTAGAAGAACTGCGGGCAGGCTATATATATCCAGAAAAACGCCCAGCCTTGTTCTGAGAGACTCAGCCGAGAACAATAGAGATCGAAATGCTCAGGTGTGCAGTCGAGTTGGGTGTGCTAGCAGGCTGAGCACAATGAAAGGTGCCCAAGTCGGGTCTCCCAACAAAGCCAAAACTTCAAGGACTCCTTTCCGTCCGTCAGGACCTGGCAAGGAAATAATTGGAAGTTCTTCGAGAACTCCTATTGCAGTAAGAGCTTTGAGAAAGCCTTTTTCAGACCTGAAAAAGAAATCTTCTCGTGCTGAACCTGATTCGGAAACCAGCAGTCTTCATGAAGAATCTGAGGAAGTTTCAGAATCCAGACCCTCATCCGGGAAGACAGAGATCAGGGTTCACCCTAAACCAGAAAATCATGAGCCTGCTGAAGCCACGTCAGCAGAAGCTGCAAGCTCTAGTTCGGGTCCCAGTAAGAGATATGTGAAGAAAAACTCTCAGAGATTCGGATTGGGGCGCCAAGATAGCCCCGCAGGTTCCTCTGGTTCATTTCCATTCAAGGAGGCCAACCAAGGGGCAAGAAATGGTGCTACTACAAGCAGGTATAATCTGAGGAACTTGAAATGTAATTCGATCCCTGATGCTGTCCCGCCAGGTTGTTCTTCCCCCACAGAGTCTAATCTCAGTAGGAGGAGGGATATTGGTAGGAAGAGAATTGGTGAACCCGAGAGTAGTTTATCTGTGAGAGGCAAGAAGATTAATGGACCTATGTCAGATGATAGGAGGAATGACAATTCTAGTCGTGGCATTTCTATCTCAGACTCTAGACGGACCAGAAACTTAAGTCCTGCAAGTGATAATGAGACTGCATCATATAGGCCACGGAGGTCATCTGCTAGGACAAGGCTCTCAAATCAGGAAAACAGAAACAGATTACCACTGGTCGAGTCCCCTCTCTTGACCCCCGCTTCCCCTCAACCAGACATATCTCTTGAGGCAGCTAGTTTCAGTTCAGAAAATCAATTCTCTGCCTCAAACCCATCAAATCGTACCAGTTCATATAGTAGACCAGGTAGTAACAGTGAGCATAGGCGACTGAACAGGTCTGTTGGTTCATATGAAGTTGGCACGGCCCGCTCTTTCATGAACCGAGATGCCTTAAGACAGTACAACCTAGATGGTATAGCTGAGATGTTATTAGCTCTAGAGAGAATTGAACAAGACGAGGAGCCAACATATGAGCAATTGCTTGTTCTGGAGACAAATCTTTTCCTTGGAGGACTTGCCTTCCATGACCAGCACAGGGACATGAGGCTGGACATTGATAATATGTCATATGAGGAGCTATTAGCTTTAGAGGAGAGGATGGGAACAGTAAGTACGGCACTACCCGAAGAAGATTTGGCAAAGTGCCTAATTAGGAGCATCTATAAGGGAACCAATGACTACAGGGAGGGTGAGGATGATGTCAAATGCAGTATATGTCAGGAAGAATATGCAGAAGGCAACGAAGTCGGAAGACTCAACAGTTGTGATCACAGGTACCATGTGGAGTGTATACACCAATGGTTGAGGCTGAAGAATTGGTGCCCCATCTGCAAGGCCTCAGTAGCACCTTCGCCTTCCTCATCTCCGCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35456.p1 GENE.R_Transcript_35456~~R_Transcript_35456.p1 ORF type:complete len:550 (+),score=97.22,zf-RING_2|PF13639.2|1.3e-11,zf-rbx1|PF12678.3|2.5e-07,zf-RING_11|PF17123.1|2.2e-07,zf-RING_11|PF17123.1|1.1e+03,zf-C3HC4|PF00097.21|8.6e-06 R_Transcript_35456:561-2210(+)
MDEYSSRRTAGRLYISRKTPSLVLRDSAENNRDRNAQVCSRVGCASRLSTMKGAQVGSPNKAKTSRTPFRPSGPGKEIIGSSSRTPIAVRALRKPFSDLKKKSSRAEPDSETSSLHEESEEVSESRPSSGKTEIRVHPKPENHEPAEATSAEAASSSSGPSKRYVKKNSQRFGLGRQDSPAGSSGSFPFKEANQGARNGATTSRYNLRNLKCNSIPDAVPPGCSSPTESNLSRRRDIGRKRIGEPESSLSVRGKKINGPMSDDRRNDNSSRGISISDSRRTRNLSPASDNETASYRPRRSSARTRLSNQENRNRLPLVESPLLTPASPQPDISLEAASFSSENQFSASNPSNRTSSYSRPGSNSEHRRLNRSVGSYEVGTARSFMNRDALRQYNLDGIAEMLLALERIEQDEEPTYEQLLVLETNLFLGGLAFHDQHRDMRLDIDNMSYEELLALEERMGTVSTALPEEDLAKCLIRSIYKGTNDYREGEDDVKCSICQEEYAEGNEVGRLNSCDHRYHVECIHQWLRLKNWCPICKASVAPSPSSSPP*

Click here to download the sequence:
Link to NCBI Protein BLAST