Transcript Information: R_Transcript_35529.p1


Annotated TAIR IDAT1G07910.1
Annotated Gene NameRNAligase
Annotated Gene Symbol(s)ATRNL, RNL, AtRLG1
Annotation TypeOrtholog
Chromosome Positionchr1:2446712-2454386 | Forward length=1104
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8437791101953
Replicate 25.9337370741712
Replicate 38.4463806688154
Condition 2: 8 Hour
Replicate 17.4317466353261
Replicate 29.7408189291452
Replicate 311.367522035677
Condition 3: 24 Hour
Replicate 110.154414735331
Replicate 28.83316806738
Replicate 310.486333432769


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35529.p1 GENE.R_Transcript_35529~~R_Transcript_35529.p1 ORF type:complete len:1196 (+),score=275.74,tRNA_lig_CPD|PF08302.7|5.4e-05 R_Transcript_35529:114-3701(+)
ATGTCATCTTCTTCATCCTCACAAAGACTAATCACTCTTCTGACTCTCACTCTCTCTTCCAGAATTCTCCCTCCTTCTCGCTTTCTCTCTCCTCATCACCAGCTTCGTTCTCCATTTCTTCGCTCTCTTCGATTCACCGCGTCTCTCTCCTCCTCTCACTCAACCATGCATCGCAACAACAACAAGCGCAGGGGTGCTAACCACAAAGAGGAAAAATGGAAAGTGAAGTCAACTCATGGAGAATCATCTTCTGCTGTTCAAGCTGCGTTAACAGATGGAGTCAAAGCTATCACCCAAAATCTTGGAGGAGTAAGCATTGCAGAACAGAGTGGGCAAGTGCATGATTCAGTTTCACCTGTTCAGATCGGGGGTGTTGTATTGCAAAACCAGACTGCTGCGTCTGGACAGAAGGCCATCTGGAAACCAAAGTCATATGGAACTTTGGCAGGTGAGTCAACGGCTTCTACGAATGAAGTTTCTGCTGAGCAAAAAGGAGTTGAAGCAGGTCCACTTGTGAAGAATGACATCTCTTTGAGTAAATTATTCAGTGGAAAGCTGCTGGAGAATTTTACTGTTGACAACAACACTTATTCGCATGCCCAGATAAGGGCTACCTTCTACCCCAAATTTGAAAATGAGAAGTCTGATCAGGAGATACGGACAAGGATGATTGAAATGGTGTCCAATGGCCTGGCTACATTGGAGGTATCGCTTAAACACTCTGGGTCTTTATTCATGTATTCCGGGCACGAGGGCGGAGCATATGCAAAGAACAGTTTTGGGAATATTTACACTGCAGTTGGTGTATTTGTTCTTGGAAGGACATTTCGTGAGGCATGGGGTACTTTGGCTAGTCAAAAGCAGGCAGAGTTCAATGACTTTCTTGAGAGGAACCACATGTGCATATCAATGGAACTGGTAACTGCTGTTCTAGGTGATCATGGGCAGCGTCCTCGAGAAGATTATGCTGTTGTGACTGCTGTTACAGAACTGGGAGTTGGAAAACCGAAGTTTTACTCTACTCCCGAAATAATTGCCTTTTGTCGCAAATGGCGGTTGCCAACTAACCAGGTTTGGCTGTTCTCTACAAGGAAATCAGTGACATCGTTCTTTGCGGCTTATGATGCTTTATGTGAAGAAGGAACAGCGACACCTGTATGCCAGGCACTGGATGAAGTAGCAGATATCTGTATACCAGGATCAAAAGACCACATAAAGGTTCAAGGGGAAATTTTGGAAGGTCTTGTTGCTCGTATTGTGAGCCCAGAAAGCTCAAAACATATTCAGCAGGTTTTGAGGGATTATCCTCCTCCGCCAATAGATGGGGCTGAGCTTGACTTGGGACCAACTCTGCGAGAGATTTGTGCTGCAAATAGGAATGATGAGAAACAGCAAATAAAAGCAATTTTGAAGGAGATCGGCTCCTCGTTTTGTCCTGACTATGTTGATTGGCTAGGGAAAGAAGCAGGAGATGTCCATTCCAGGACCGCTGATAGATCCTTTGTCACAAAGTTTTTGCAAGCTCATCCAGCAGATTTTTCAACTCGCAAATTGCAGGAAATGATTCGCTTGATGAAAGAAAGGCGGTTTCCTGCTGCATTCAAGTGTTACTATAACTTGCACAAGGCCGACTCCATGTCCAATGACAATATATATTACAAGATGGTCATTCATGTGCACAGTGACTCAGCTTTCAGGCGATATCAGAAAGAGATGAGGCATGATCCTGGTCTCTGGCCATTATATAGAGGATTTTTTGTTGATATAAACTTGTTCAGAGAAAGCAAGGATAGAGTTGCTGAAGTTGGGAGAGACAGGACTGATACGAGAAATAAGGTTAATGGTAATGACGATGTCGCAGGAGTGGATTCACTTGCTGATGAAGACGCAAATTTGATGGTTAAATTGAAATTCCTCACATATAAGTTGCGAACTTTCTTGATCCGAAATGGTTTGTCGATCCTTTTCAAGGATGGCCCTACCAATTATAGGACATATTATCTAAGACAAATGAAAATTTGGGGCACTTCAGCAGCAAAGCAAAAGGAACTGAGCAAGTTGCTCGATGAATGGGCTGTGCATATAAGAAGGAAGTGCGGCGGGAAACAGTTGGGTTCTGATATATACCTTAGTGAGGCGGAGCCTTTCCTTGAACAATATGCCAGACGAAGTCCTGCAAATCAAGCACTCATAGGTTCAGCTGGAAACGTGGTTAGATCTGAAGATTTCTTGGCCATTGTTGGAGACATAGATGAAGAGGGTGACCTTCAGAGAGAACATGAAATGGAACCATTAACCCCACCTCCTAGCACAAAAGAAGCTATACAGAAAAAAGAAGGTCTTATTGTATTCTTTCCAGGGATACCAGGCTGTGCTAAGTCTGCACTTTGCAAGGAACTACTAAATGCCCCTGGTGGTTTTGGAGATGATCGTCCTATTCAAAGTCTAATGGGTGATCTCGTTAAAGGACGATACTGGCAGAAAGTTGCTGATGAATGCAAAAGAAAACGCAATTCTATAATGCTTGCTGACAAAAATGCGCCAAATGAGGAAGTTTGGAGACAGATTGAGAACATGTGTCAAACCACCAAGGCATCTGCTGTTCCAGTCATACCAGATTCTACAGGCTCTGATTCAAATCCTTTTTCATTGGATGCATTGGCTGTCTTTATGTTTCGTGTGCTTCAACGAGTTAATCATCCGGGAAATCTTGACAAGGCATCTCCAAATGCTGGCTTTGTATTACTAATGTTTTACCACCTTTATGAGGGCAAGAGCCGCAAAGAATTTGAAGCTGGACTAATTGAACGGTTTGGTTCACTTGCAAAGATGCCCTTGCTCAAACCAGAAAGCCCTTGTCTACCTGATTCTGTCAAATCAATGTTGGAAGAGGGGATCAACTTATACAGGCTACATAATAAGAGGCATGGGAGAACGGAATCAACCAAAGGGACATATGCAAATGAGTGGGCTAAATGGGAGAAGCAGATGCGGGAAACTTTATTGAGCAATGCTGATTACCTTGACTCAATTCAGGTTCCCTTTGAGACTGCAGTGAGCTCTGTTTTGGAGCAACTGAAAACTATTGCAAAAGGAAACTATATAGCCCCAAGTACTGAAAGGAAGAGGCTTGGTGCAATTGTTTTTGCTGCTGTTAGTCTGCCTGTGAGCGAAGTTCATGGGGTCATCAATGGCTTTGCTAAGGAGCACTCCAATGTCGAAGCTTTCTTCAAAGACAAGAATTTGGAAGATACCCTTAAAAGGGCTCATGTCACTCTTGCTCACAAACGAAGTCATGGTGTCACAGCAGTAGCTAATTACGGGCAGTGCATGAACCGTAAAGTCCCTGTGAAGCTGACTGCATTACTGTTCTCCAATAAAATGGCAGCCTTTGAAGCACAATTTGGTTTAGTGGACGGTGAAATGATCATTTCGAAAAATGAGTGGCCGCATGTTACTGTGTGGACTGATGTTGGAATTCCTGCCAAGGAAGCAAATACGTTGCCAGGACTAGTCGCACAGGGTAAGGCTTCTCGTGTAGAAATTGATCCTCCTTTGACTGTGGCAGGAGAGGTGGAGTTCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35529.p1 GENE.R_Transcript_35529~~R_Transcript_35529.p1 ORF type:complete len:1196 (+),score=275.74,tRNA_lig_CPD|PF08302.7|5.4e-05 R_Transcript_35529:114-3701(+)
MSSSSSSQRLITLLTLTLSSRILPPSRFLSPHHQLRSPFLRSLRFTASLSSSHSTMHRNNNKRRGANHKEEKWKVKSTHGESSSAVQAALTDGVKAITQNLGGVSIAEQSGQVHDSVSPVQIGGVVLQNQTAASGQKAIWKPKSYGTLAGESTASTNEVSAEQKGVEAGPLVKNDISLSKLFSGKLLENFTVDNNTYSHAQIRATFYPKFENEKSDQEIRTRMIEMVSNGLATLEVSLKHSGSLFMYSGHEGGAYAKNSFGNIYTAVGVFVLGRTFREAWGTLASQKQAEFNDFLERNHMCISMELVTAVLGDHGQRPREDYAVVTAVTELGVGKPKFYSTPEIIAFCRKWRLPTNQVWLFSTRKSVTSFFAAYDALCEEGTATPVCQALDEVADICIPGSKDHIKVQGEILEGLVARIVSPESSKHIQQVLRDYPPPPIDGAELDLGPTLREICAANRNDEKQQIKAILKEIGSSFCPDYVDWLGKEAGDVHSRTADRSFVTKFLQAHPADFSTRKLQEMIRLMKERRFPAAFKCYYNLHKADSMSNDNIYYKMVIHVHSDSAFRRYQKEMRHDPGLWPLYRGFFVDINLFRESKDRVAEVGRDRTDTRNKVNGNDDVAGVDSLADEDANLMVKLKFLTYKLRTFLIRNGLSILFKDGPTNYRTYYLRQMKIWGTSAAKQKELSKLLDEWAVHIRRKCGGKQLGSDIYLSEAEPFLEQYARRSPANQALIGSAGNVVRSEDFLAIVGDIDEEGDLQREHEMEPLTPPPSTKEAIQKKEGLIVFFPGIPGCAKSALCKELLNAPGGFGDDRPIQSLMGDLVKGRYWQKVADECKRKRNSIMLADKNAPNEEVWRQIENMCQTTKASAVPVIPDSTGSDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGFVLLMFYHLYEGKSRKEFEAGLIERFGSLAKMPLLKPESPCLPDSVKSMLEEGINLYRLHNKRHGRTESTKGTYANEWAKWEKQMRETLLSNADYLDSIQVPFETAVSSVLEQLKTIAKGNYIAPSTERKRLGAIVFAAVSLPVSEVHGVINGFAKEHSNVEAFFKDKNLEDTLKRAHVTLAHKRSHGVTAVANYGQCMNRKVPVKLTALLFSNKMAAFEAQFGLVDGEMIISKNEWPHVTVWTDVGIPAKEANTLPGLVAQGKASRVEIDPPLTVAGEVEFF*

Click here to download the sequence:
Link to NCBI Protein BLAST