Transcript Information: R_Transcript_355363.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeHomolog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value6E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5278662833411
Replicate 21.4648581685789
Replicate 33.7290037947225
Condition 2: 8 Hour
Replicate 12.2777548788135
Replicate 22.9467828782958
Replicate 32.2513625575674
Condition 3: 24 Hour
Replicate 13.7373174556728
Replicate 23.9323329804905
Replicate 32.8844261990485


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_355363.p1 GENE.R_Transcript_355363~~R_Transcript_355363.p1 ORF type:3prime_partial len:129 (-),score=28.31,EF-hand_1|PF00036.28|16,EF-hand_1|PF00036.28|1.2e-05,EF-hand_1|PF00036.28|0.0012,EF-hand_6|PF13405.2|1.8,EF-hand_6|PF13405.2|0.009,EF-hand_6|PF13405.2|0.0029,EF-hand_7|PF13499.2|1.4e+02,EF-hand_7|PF13499.2|6.5e-08,EF-hand_5|PF13202.2|15,EF-hand_5|PF13202.2|0.02,EF-hand_5|PF13202.2|2 R_Transcript_355363:1-384(-)
ATGGGTTGTGCCCGGTCTACACCAAGATTGCCTGCTTCTGATAAATTCCCTGTTCTTGCTGCTGAAACGCCTTTCAATGTGGATGAAGTGGAAACTCTATATGAATTGTACAGTAAACTCAGCAATTCTGTTATTAAAGATGGTTTCATACAAAAGGAAGATCTTCAGCTTGCCTTATTCAGAACTACCAACAGCAAGAACCTCTTTCTTGATAGAATGTTTGATCTCTTTGATGTCAAGCAAAATGGCCGCATTGAATTTGGAGAGTTTGTTCGAACATTGAGTATCTTCCACCCTAAAACTTCTGTAACAGAGAAAAGTAACTATGCATTCCGGTTGTATGATCTTAGGGGAACTGGCTTTATTGAGTATGAAGAGTTAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_355363.p1 GENE.R_Transcript_355363~~R_Transcript_355363.p1 ORF type:3prime_partial len:129 (-),score=28.31,EF-hand_1|PF00036.28|16,EF-hand_1|PF00036.28|1.2e-05,EF-hand_1|PF00036.28|0.0012,EF-hand_6|PF13405.2|1.8,EF-hand_6|PF13405.2|0.009,EF-hand_6|PF13405.2|0.0029,EF-hand_7|PF13499.2|1.4e+02,EF-hand_7|PF13499.2|6.5e-08,EF-hand_5|PF13202.2|15,EF-hand_5|PF13202.2|0.02,EF-hand_5|PF13202.2|2 R_Transcript_355363:1-384(-)
MGCARSTPRLPASDKFPVLAAETPFNVDEVETLYELYSKLSNSVIKDGFIQKEDLQLALFRTTNSKNLFLDRMFDLFDVKQNGRIEFGEFVRTLSIFHPKTSVTEKSNYAFRLYDLRGTGFIEYEELR

Click here to download the sequence:
Link to NCBI Protein BLAST