Transcript Information: R_Transcript_355396.p1


Annotated TAIR IDAT5G53440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21683679-21687970 | Reverse length=1181
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1960829780963
Replicate 21.9306942911538
Replicate 32.1063666755083
Condition 2: 8 Hour
Replicate 13.3773606823786
Replicate 23.3412811946599
Replicate 31.4604744177323
Condition 3: 24 Hour
Replicate 11.055531366791
Replicate 22.2815785059218
Replicate 32.2642453124376


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_355396.p1 GENE.R_Transcript_355396~~R_Transcript_355396.p1 ORF type:5prime_partial len:87 (+),score=17.21 R_Transcript_355396:3-263(+)
AAGGGTCAAAATGATACCGTTGATACAAATGCTGACATAGATATTGTTGGTAGTGAGTGTAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACCGGTGGTGCAGAGCCGGCTTCTGATGAACAGTTGGATGTTGCCGTAAGTGGTCCCTTAATTTTGTCCCATGATTCTGTTAAGGTTTGTGAGGCTTTAATGCCAGTGTCAAATGAGTCGGAGTCGGTTATTTTAAGTCGGATACATCATGCTCCTGAAAGTACACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_355396.p1 GENE.R_Transcript_355396~~R_Transcript_355396.p1 ORF type:5prime_partial len:87 (+),score=17.21 R_Transcript_355396:3-263(+)
KGQNDTVDTNADIDIVGSECKTGGAESASKTGGAEPASDEQLDVAVSGPLILSHDSVKVCEALMPVSNESESVILSRIHHAPESTH*

Click here to download the sequence:
Link to NCBI Protein BLAST