Transcript Information: R_Transcript_355397.p1


Annotated TAIR IDAT5G53440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21683679-21687970 | Reverse length=1181
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.383567047029
Replicate 212.981583590722
Replicate 310.468132772435
Condition 2: 8 Hour
Replicate 112.111288038422
Replicate 216.950991073157
Replicate 311.613127224871
Condition 3: 24 Hour
Replicate 112.466336182786
Replicate 212.687702695117
Replicate 313.179693144798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_355397.p1 GENE.R_Transcript_355397~~R_Transcript_355397.p1 ORF type:5prime_partial len:186 (+),score=56.55 R_Transcript_355397:1-558(+)
TTGGGTACTAATGAGCAATTAGATAGCTCTGTTGATTGCGGTGTCCAACTTGAAGAACCAACTCTCGAGGTGGCAGATTTGGCTCCAATCACTGCTGAAGAGGAAGGGAAGAATCTTGTACCCATAATCAGTGAAGAAGGGCCAACTAGTGTACCTTCTTTGGAGAGTACTGATCTGCCCTTGGATGAAAGCCAAATACCTGTTCTTAACGTGGAGGAGATGGATGAAAAAATCTCTGGCGAAATGATGTCTGAGAATAATGATGATGATAAGGGTCAGAATGATTCCATTGACACAAATGCTGACATAGATATTGTTGGTAGTGAGTGTAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACTGGTGGTGCAGAGTCGGCTTCTGATGAACAGTTGGATGTTGCCGTAAGTGGTCCCTTAATTTTGTCCCATGATTCTGTTAAGGTTTGTGAGGCTTTAATGCCAGTGTCAAATGAGTCGGAGTCGGTTATTTTAAGTCGGATACATCATGCTCCTGAAAGTACACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_355397.p1 GENE.R_Transcript_355397~~R_Transcript_355397.p1 ORF type:5prime_partial len:186 (+),score=56.55 R_Transcript_355397:1-558(+)
LGTNEQLDSSVDCGVQLEEPTLEVADLAPITAEEEGKNLVPIISEEGPTSVPSLESTDLPLDESQIPVLNVEEMDEKISGEMMSENNDDDKGQNDSIDTNADIDIVGSECKTGGAESASKTGGAESASKTGGAESASDEQLDVAVSGPLILSHDSVKVCEALMPVSNESESVILSRIHHAPESTH*

Click here to download the sequence:
Link to NCBI Protein BLAST