Transcript Information: R_Transcript_355398.p1


Annotated TAIR IDAT5G53440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21683679-21687970 | Reverse length=1181
E-Value5E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0828991609239
Replicate 24.0058731057411
Replicate 34.0689599677376
Condition 2: 8 Hour
Replicate 15.3160101530203
Replicate 26.3257757840196
Replicate 34.179647182326
Condition 3: 24 Hour
Replicate 15.5884136014806
Replicate 26.0942162723964
Replicate 33.599951428766


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_355398.p1 GENE.R_Transcript_355398~~R_Transcript_355398.p1 ORF type:5prime_partial len:152 (-),score=40.84 R_Transcript_355398:146-601(-)
AATATTGTACCCATAAACAGTGAAGAAGGGCCAACTAGTGTACCTTCTTTCGAGAGTACGGATCTGCCCTTGGATGTCGGGAATGAAAGCGAAATACCTGTTGTTAATGTGGAGGAGATGGAGGAAAAAATCTCCGGAGAAATGATGTCTGAGAACAATGATGATGATAAGGGTCAAAATGATACCGTTGATACAAATGCTGACATAGATATTGTTGGTAGTGAGTGTAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACTGGTGGTGCAGAGTCGGCTTCTGATGAACAGTTGGATGTTGCCGTAAGTGGTCCCTTAATTTTGTCCCATGATTCTGTTAAGGTTTGTGAGGCTTTAATGCCAGTGTCAAATGAGTCGGAGTCAGTTATTTTAAGTCGGATACATCATGCTCCTGAAAGTACACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_355398.p1 GENE.R_Transcript_355398~~R_Transcript_355398.p1 ORF type:5prime_partial len:152 (-),score=40.84 R_Transcript_355398:146-601(-)
NIVPINSEEGPTSVPSFESTDLPLDVGNESEIPVVNVEEMEEKISGEMMSENNDDDKGQNDTVDTNADIDIVGSECKTGGAESASKTGGAESASKTGGAESASDEQLDVAVSGPLILSHDSVKVCEALMPVSNESESVILSRIHHAPESTH*

Click here to download the sequence:
Link to NCBI Protein BLAST