Transcript Information: R_Transcript_355444.p1


Annotated TAIR IDAT5G15170.1
Annotated Gene Nametyrosyl-DNA phosphodiesterase-related
Annotated Gene Symbol(s)TDP1
Annotation TypeOrtholog
Chromosome Positionchr5:4926300-4929307 | Reverse length=605
E-Value5.4E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15872139960625
Replicate 20.36515305071823
Replicate 30.19918902257524
Condition 2: 8 Hour
Replicate 10
Replicate 20.19444245079292
Replicate 30.31568018470238
Condition 3: 24 Hour
Replicate 10.99816553163931
Replicate 20.19178485991806
Replicate 30.19032786684258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_355444.p1 GENE.R_Transcript_355444~~R_Transcript_355444.p1 ORF type:3prime_partial len:115 (+),score=5.89,Tyr-DNA_phospho|PF06087.8|9.3e-06 R_Transcript_355444:990-1331(+)
ATGTTTCTAACATTTTTCTTTCATCTCTATTACCCTAGTGCCCTAATAGGGCTCTTGCCCAGGCGGGGTAAGGGGGGTTGGATGCACGCAGTCTTTCCCCGGCAAAAACATGCAGTTTATCATATTCATTTTGACTTTGCTGTTACACTGGTATGTTTAATATATTTGCAGTTGCCTGAAGTCATAGCCAATTTGCCAGCCTTTGCTGGATCCAAAATTGACGCTTCCTTCTTTAAGAAGTTTGATTATGGAAATGCAGTGGTCAGATTGATTGCATCAGTTCCTGGATATCATTCAGGGTCGAATTTAAAGAAATGGGGTCATATGAAACTACGTTCCATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_355444.p1 GENE.R_Transcript_355444~~R_Transcript_355444.p1 ORF type:3prime_partial len:115 (+),score=5.89,Tyr-DNA_phospho|PF06087.8|9.3e-06 R_Transcript_355444:990-1331(+)
MFLTFFFHLYYPSALIGLLPRRGKGGWMHAVFPRQKHAVYHIHFDFAVTLVCLIYLQLPEVIANLPAFAGSKIDASFFKKFDYGNAVVRLIASVPGYHSGSNLKKWGHMKLRSI

Click here to download the sequence:
Link to NCBI Protein BLAST