Transcript Information: R_Transcript_356199.p3


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57762534666831
Replicate 20.26577595463668
Replicate 30.43493805562315
Condition 2: 8 Hour
Replicate 10.61989531512013
Replicate 20
Replicate 30.68930166912862
Condition 3: 24 Hour
Replicate 10.29060515478107
Replicate 20.27918049228579
Replicate 30.41558932949805


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_356199.p3 GENE.R_Transcript_356199~~R_Transcript_356199.p3 ORF type:complete len:158 (+),score=22.27,zf-RVT|PF13966.2|5.5e-07,zf-RVT|PF13966.2|3.8e+02 R_Transcript_356199:1200-1673(+)
ATGTTGGGAAAAGCTAGAACCAGAGACAAACTTAAACAAATGGCGATCTGCTTGAATGATGCTTGCCCGCTATGTGATAGCCAGATTGAATCCCCTGCACACCTATTTTTCTCATGTCCTTTCAGTGATATAATGATAAAGATGTTTTTCCAATGGCATGGGATAAATAAAACTAGATGGAGTTTATTCTCATTGCCTAGATGGATACAAAGAAGTGGAAAATCTTCAGTTTGCAGAAAAGTGATATATGTTGGTTTTGTGGGTTTGTTGTATACCATTTGGAGGGCTAGAAATGTAGCAGTATGGGACAAGAAGGTGCCTGTGCCAAAGCGCATGTTCCACCTGCTGCAGAGACAGCTGCAATACAGGGTTCTGAGTTGCATATCAGAGAGGACTCCAGTTGAGGATAAGAGCTGGATTCTTCAACTGTTTTCTTCTGATTTAGTTGTTAATTATTTGTATGTTGCCTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_356199.p3 GENE.R_Transcript_356199~~R_Transcript_356199.p3 ORF type:complete len:158 (+),score=22.27,zf-RVT|PF13966.2|5.5e-07,zf-RVT|PF13966.2|3.8e+02 R_Transcript_356199:1200-1673(+)
MLGKARTRDKLKQMAICLNDACPLCDSQIESPAHLFFSCPFSDIMIKMFFQWHGINKTRWSLFSLPRWIQRSGKSSVCRKVIYVGFVGLLYTIWRARNVAVWDKKVPVPKRMFHLLQRQLQYRVLSCISERTPVEDKSWILQLFSSDLVVNYLYVAS*

Click here to download the sequence:
Link to NCBI Protein BLAST