Transcript Information: R_Transcript_35632.p1


Annotated TAIR IDAT4G32910.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15881364-15885210 | Forward length=716
E-Value7.7E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.888359857075
Replicate 28.4178715954743
Replicate 312.350637321428
Condition 2: 8 Hour
Replicate 111.960837255336
Replicate 211.38653199747
Replicate 315.976763264949
Condition 3: 24 Hour
Replicate 116.874517294096
Replicate 212.196456529352
Replicate 315.079317284291


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35632.p1 GENE.R_Transcript_35632~~R_Transcript_35632.p1 ORF type:complete len:434 (+),score=74.32,Nucleopor_Nup85|PF07575.9|5.2e-108 R_Transcript_35632:2004-3305(+)
ATGCCACGTCTACGTCCTGACTTACTGGCTGGAAGGTTGGGTGAATGTTATGGAAATAAGACTGATTTCATCAAGGCTTGGGAGACATGGCGAGCACGAGTTACCAAGCTGGAGTGTAGTGCTTTCTGGGTTGAATGTGGCCATCAGCAAACCAGAGAGGGTTTGAGAAGAATGCTACAGATTATGCTAGGAAATGCTGAGCATCTTTCTGCAACAACATGTAACTGGGTTGAACTTTATGTATCTCATTTTCTATACATCAGGCCATTCACTGTGGGTTTAGAAAGTATGTACAGCCTAGCTCAGAAATGCACCCAGTTGAAGCCTGTGTCCCATTCCAATAGCCTGATGGGACTTTTAATTGGAATACTTGGAGAGAATACTGAGGTCGTGTTAGCAGAATGCTCCAAAGCTTTTGGCCCATGGATGGTCACCCATGCCATAGAGTTATTGACAGCCGGCAATGATCAGTCAGAAATGCTTTTGCGTGAAGTACACCACAACCTGGGGGGAGTTAGTATTGGGGAGCTCCATCGACTTGTGTACGCTCAAGTCCTAGCCTCTCATAAACTAACATGGCAGATTGCTCCAGTGTATTTAATGTCATGCTTGAAGCCGGGAATGGGTTTGTTGGAGATCTTACTATACAGGCAACCAGTACAACACAAGCAAGGATTGCTTAAGAACCTGGAGATCTGCCGTCTGTATGAACTTGAAACCGTCAGTTCAAACATAATGAAGATTGCTGGGGTACATCACTGGAAACATGGTCGGAAAGGTTCTGGTATCTATTGGCTTCAACAAGCTCAGGATGAGATTCGCCTCAATAAAATTGCTCAACAGCTGTTTGATTTTGTTGGGAAATCAATATCTGAAGAAAGTTTCAAACAATGGGAAGGATTGATCGAGCTACTAGGTTCTGACACAAGAACTGCTGGGGGTCTTGAATTTCTGCACAAGTACAGAGATTTTATAAAGTCGCTGCAGCAGGTTTGTGATGGAAAGACTAATGATGCTGCTCGGCAAGCTGTAGAATCACTCATTCTGCTCATGAAAAATCCATCTACACCTCAGCGTTTCTGGCTACCAGTTCTTTATGACGCGTTGAAGCTGCTTACATGGCGGGAGGGTCCTCTTCTTGATGTCTCACAAACCAGCCTATTGTTGAATAAGCTGCAAGAGCTATCCATGGCAAGGCTGCGCCCTGACTATGTTGAGGCAGACCTGCCACCTCAAGCGGTGGATACTGTGAGGCTGGCTTTGGCTACAAATCTTGGACGTGCTATTCTTGAAGAGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35632.p1 GENE.R_Transcript_35632~~R_Transcript_35632.p1 ORF type:complete len:434 (+),score=74.32,Nucleopor_Nup85|PF07575.9|5.2e-108 R_Transcript_35632:2004-3305(+)
MPRLRPDLLAGRLGECYGNKTDFIKAWETWRARVTKLECSAFWVECGHQQTREGLRRMLQIMLGNAEHLSATTCNWVELYVSHFLYIRPFTVGLESMYSLAQKCTQLKPVSHSNSLMGLLIGILGENTEVVLAECSKAFGPWMVTHAIELLTAGNDQSEMLLREVHHNLGGVSIGELHRLVYAQVLASHKLTWQIAPVYLMSCLKPGMGLLEILLYRQPVQHKQGLLKNLEICRLYELETVSSNIMKIAGVHHWKHGRKGSGIYWLQQAQDEIRLNKIAQQLFDFVGKSISEESFKQWEGLIELLGSDTRTAGGLEFLHKYRDFIKSLQQVCDGKTNDAARQAVESLILLMKNPSTPQRFWLPVLYDALKLLTWREGPLLDVSQTSLLLNKLQELSMARLRPDYVEADLPPQAVDTVRLALATNLGRAILEEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST