Transcript Information: R_Transcript_35638.p1


Annotated TAIR IDAT4G32910.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15881364-15885210 | Forward length=716
E-Value3E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.549528368839
Replicate 25.3691163226708
Replicate 37.8578205891167
Condition 2: 8 Hour
Replicate 18.0940800969064
Replicate 27.4381311737831
Replicate 310.226791014813
Condition 3: 24 Hour
Replicate 111.693685594153
Replicate 27.7949979446947
Replicate 313.196329229106


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35638.p1 GENE.R_Transcript_35638~~R_Transcript_35638.p1 ORF type:internal len:481 (+),score=86.05,Nucleopor_Nup85|PF07575.9|1.7e-79 R_Transcript_35638:1-1440(+)
GCCCCCCAAATTTCCAAAACCCCCCAAATTTCCAAAACCCTCTCATCCTCTGCGGCGAAGATGCCGGCACCGACGTCAGATTCCGACACTCGATTCTCTCTCCTCCCAAAACCATTCTCCACCAGCGACGAGCCTCCGCTGCCAGTGACATACCCTCTCCGCCACTCTCTCTCCTCCCCAATCCATCGAATCGCCATCAACTGGTCTCGTGGCAACACTCTCCGTGTCTCTCTCTTCTCAAAACCTAACCCTAACTCCTCCGAATCCGACGATTCCGGAGGAAACGTCGTCGAGTTCAAGCTTGGTGGCGCCGGTAATGGAGGAATCAAAGATAATGATGCTCAGTGGAGGAGGATTGTGTACGGTTCTGTTAAACCTTATGCCGTGTTTCAGAACAAGAAGAACTCCGCTTTGGCCATGTCTAAGATTCCTGTTGGAGCTCTTTCCAATGTCGACTGGTGGGAGCATGTCATGGAGTATAGCCAGGAGATAAACTCTCTTCTTGGTACCACAAAGTCAGTCACTGGTTCAACAGTTGATGACCCAAGAACTATTGTGAAGGCAGATGAGGAGCCAAGCAGTTTAAAGGCTGCATGGGAGCTGCTGGAAATTTTTTATGCAGACAAACAGTTTCAAGCTTGGCTTCCTGAACGTTTTGTCGATTGGTTAGATGACTATGATGCCCTCTTTTCAGAAACTCAGTCCACAGTGCACTCAAAACTTTTGGATTTGCAACGTGACCTTTTGCGCTTTGAGGTGATTGAGGATCATCCAAAATACTGGGATTGCTTATCATCTGCTCTAGCAGTTGGCTGGCTGGAGGTTGTGGTGAAACTACTGCGCTTACATGGGTCTTATCAACTTGATCAGCTTGGTAGACGCGAGACAGAAAATGGACTTGTCGAAGCAGTTGTTGTTCTTGTTTCTAAGATGCCACATCTACGTCCTGACTTACCGGCTGGAAGGTTGGGTGAGTGTTATGGAAATAAGACTGATTTCATCAAGGCTTGGGAGACATGGCGAGCACGAGTTACCAAGCTGGAGTGTAGTGCTTTCTGGGTTGAATGTGGCCATCAGCAAACCAGAGAGGGTTTGAGAAGAATGCTACAGATTATGCTAGGAAATGCTGAGCATCTTTCTGCAACAACATGTAACTGGGTTGAACTTTATGTATCTCATTTTCTATACATCAGGCCATTCACTGTGGGTTTAGAAAGTATGTACAGTCTAGCTCAGAAATGCATCCAATTGAAGCCTGTGTCCCTTTCCAGTAGCCTGACGGGACTTTTAATTGGAATACTTGGAGAGAATACTGAGGTCGTGTTAGCAGAATGCTCCAAAGCTTTTGGCCCATGGATGGTCACCCATGCCATAGAGTTATTGACAGCCGGCAATGATCAGTCAGAAATGGTTTTGCATGAAGTACACCACAACCTGGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35638.p1 GENE.R_Transcript_35638~~R_Transcript_35638.p1 ORF type:internal len:481 (+),score=86.05,Nucleopor_Nup85|PF07575.9|1.7e-79 R_Transcript_35638:1-1440(+)
APQISKTPQISKTLSSSAAKMPAPTSDSDTRFSLLPKPFSTSDEPPLPVTYPLRHSLSSPIHRIAINWSRGNTLRVSLFSKPNPNSSESDDSGGNVVEFKLGGAGNGGIKDNDAQWRRIVYGSVKPYAVFQNKKNSALAMSKIPVGALSNVDWWEHVMEYSQEINSLLGTTKSVTGSTVDDPRTIVKADEEPSSLKAAWELLEIFYADKQFQAWLPERFVDWLDDYDALFSETQSTVHSKLLDLQRDLLRFEVIEDHPKYWDCLSSALAVGWLEVVVKLLRLHGSYQLDQLGRRETENGLVEAVVVLVSKMPHLRPDLPAGRLGECYGNKTDFIKAWETWRARVTKLECSAFWVECGHQQTREGLRRMLQIMLGNAEHLSATTCNWVELYVSHFLYIRPFTVGLESMYSLAQKCIQLKPVSLSSSLTGLLIGILGENTEVVLAECSKAFGPWMVTHAIELLTAGNDQSEMVLHEVHHNLG

Click here to download the sequence:
Link to NCBI Protein BLAST