Transcript Information: R_Transcript_35641.p1


Annotated TAIR IDAT5G51300.1
Annotated Gene Namesplicing factor-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20849881-20852295 | Reverse length=804
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.231690191473
Replicate 215.766835804518
Replicate 323.819583926261
Condition 2: 8 Hour
Replicate 126.89481056472
Replicate 229.461784542932
Replicate 336.687501913933
Condition 3: 24 Hour
Replicate 132.564062804925
Replicate 223.620825212822
Replicate 331.209740805103


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35641.p1 GENE.R_Transcript_35641~~R_Transcript_35641.p1 ORF type:complete len:803 (+),score=211.22,SF1-HH|PF16275.1|1.5e+04,SF1-HH|PF16275.1|1.2e-28,RRM_1|PF00076.18|9.5e-20,RRM_5|PF13893.2|5.8e-10,RRM_6|PF14259.2|6.2e-08,KH_1|PF00013.25|2.7e-07,KH_3|PF13014.2|1.9e-05 R_Transcript_35641:84-2411(+)
ATGGAAGAAGCTCAAAATCTCTCTGAAAACTTCCCCATTTCTTTCCCTCAAAAACCTCTCCAAACCCTAGTTTCGTACGACCATGACGACGATTCCAATTCCAATCCAAATCCACCTCAAACCCTAGCTCCTCCTCAAGATCTTCAAACCCTAGATCACAACTACAACAACAACAACAATTCACATAATCACCACCAAAACGGAAACCCTAACGATTCCAACGTTCCTCCTCGAAGCGAATCTCTACCTCGTAGCGAATCCGTTCCTCGCAGCGACACTCCGAACAACAACCAATCCGGCGGCGAGGAGGAGACGACGAGCCGCCGTAAGCGACGGAGCCGCTGGGACCCACCTCCGTCATCCGAAAACACCACCGCCGCCGACGGCGCCACCGGAGACGGAGGATCCACTACCGGAGGAGGGAGGAAGAGGAAGTCAAGGTGGGCGGACGACGAGCCGAAGCCGGTGATACAGCTCCCGGATTTCATGGGAGGTATTGAATTCGATCCCGAAGTTCAAGCATTGAATAGTAGACTACTTGAAATAAGTAGGAAATTACAATCTGGAATGCCATTAGATGATAGACCCGAAGGAGCTAGGTCTCCGTCCCCGGAACCGATTTATGATAACATGGGAATTAGGATTAATACTCGTGAATATCGTGCTCGTGAGAAATTGAATCGAGAAAGACAAGAGATTATCTCTCAGATTATTAAAAAGAATCCTGCATTTAAGCCACCTGCTGATTATAGACCCCCGAAGCTTCAAAAGAAGCTTTATATTCCTCAAAAGGAGTTCCCTGGTTACAATTTTATTGGGCTCATTATTGGGCCGAGGGGGAATACTCAGAAGAGGATGGAGAAGGAGACGGGGGCGAAGATTGTGATTCGAGGGAAAGGGTCTGTTAAGGAAGGGAGGTTGCAACAAAAACAGAATTTGAAGCCTGACCCTTCTGAGAATGAGGATTTGCATGTTTTGGTTGAGGCTGATACTCAGGAATCGCTTGAGGCGGCTGCTGCTATGGTGGAGAAGTTGTTGCAGCCTGTTGATGAGGTTTTGAATGAGCATAAGAGGCAGCAGTTGAGGGAGTTGGCTGCGTTGAATGGGACTATTAGGGATGAGGAGTATTGTAGGTTGTGTGGTGAGCCGGGCCATAGGCAGTATGCTTGTCCTTCGAGGACTACAACATTTAAGAGTGATGTTTTGTGTAAGATATGTGGGGATGGTGGTCATCCAACGATTGATTGTCCTGTGAAAGGGACTACTGGGAAGAAGATGGATGATGAGTATAGGAACTTTTTGGCTGAGTTGGGTGGTACCGTGCCTGAATCGGTGGCGAAGTCGGAGGATTCTTCGGCCCCGAGTGGTGGTGGTGGTGGTAGTGGAAGTAATCCTCCTTGGCAGAGTGGAAGTGGTGGTGGTGCTGCTGTTGGAGGAACTCATAATGGTTTGGGGTCGAGTTTGATTAAGCCAAAAGAGTATGATGAGACAAACTTGTACATTGGGTACTTGCCACCTACACTCGATGATGATGGTTTGATTCGTCTGTTTTCGCCTTTCGGTGAGATTGTGATGGCTAAGGTGATCAAGGACCGGGTTACTCAGCTAAGCAAAGGGTATGGGTTCGTTAAGTACTCTAATGTTGAACAGGCTAACACTGCAATTGCTAGTATGAATGGGTATCGTTTAGATGGCCGGACCATTGCTGTTAGGGTTGCTGGGAAACCCCCTCAACCACCAACTGGTCCTCAGCCTCCTCAAGCTCCTTCAATGCCGCCATACCCGGCTGCGAATCAAGGTCCTCCTGGGGCTTACCCATCACAGCAATTCACAACTGGTGGTCCTCTTGGTGGGGCTCCAGTCCCTTGGGGAGCTCCTCCAGTTCCTCCAACTCCTTATGGTGGTGGTGCTTATCCTCCACCTCCACCACCGGGGTCGAATTATTATCCCCCACCACCATCATATGGTGTGCAGTATCCTCCTCCTCCAAGTGGTGTCTCGTCGCAACAGACTGTGCCTGTTCCTCCTCCTGGGGATGCACAACAACCAAATTACCTTCCACCAGGAGTGCAATCCCAGCCACCTGCTAGTTCTACCGCTTCTTCAGTGGCACCAGCTGCTCAGCCTGCTACTTACTTGCCTTCGTCTTATGGGTATGCGCCGCCTTATTATGGAGTTCCACCACCAGCCCCACCTCCTACTGATCAACTGCCACAAAGCATGGCAAATGTCCCTTGGGCCTCAAAGCCACCGGCTCCTGCTGCAGAGAAGACAACAACACAGGGAGCTGATGCAGAGTACGAGAAGTTCATGGCAGAGATGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35641.p1 GENE.R_Transcript_35641~~R_Transcript_35641.p1 ORF type:complete len:803 (+),score=211.22,SF1-HH|PF16275.1|1.5e+04,SF1-HH|PF16275.1|1.2e-28,RRM_1|PF00076.18|9.5e-20,RRM_5|PF13893.2|5.8e-10,RRM_6|PF14259.2|6.2e-08,KH_1|PF00013.25|2.7e-07,KH_3|PF13014.2|1.9e-05 R_Transcript_35641:84-2411(+)
MEEAQNLSENFPISFPQKPLQTLVSYDHDDDSNSNPNPPQTLAPPQDLQTLDHNYNNNNNSHNHHQNGNPNDSNVPPRSESLPRSESVPRSDTPNNNQSGGEEETTSRRKRRSRWDPPPSSENTTAADGATGDGGSTTGGGRKRKSRWADDEPKPVIQLPDFMGGIEFDPEVQALNSRLLEISRKLQSGMPLDDRPEGARSPSPEPIYDNMGIRINTREYRAREKLNRERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPQKEFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKQNLKPDPSENEDLHVLVEADTQESLEAAAAMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPSRTTTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYRNFLAELGGTVPESVAKSEDSSAPSGGGGGSGSNPPWQSGSGGGAAVGGTHNGLGSSLIKPKEYDETNLYIGYLPPTLDDDGLIRLFSPFGEIVMAKVIKDRVTQLSKGYGFVKYSNVEQANTAIASMNGYRLDGRTIAVRVAGKPPQPPTGPQPPQAPSMPPYPAANQGPPGAYPSQQFTTGGPLGGAPVPWGAPPVPPTPYGGGAYPPPPPPGSNYYPPPPSYGVQYPPPPSGVSSQQTVPVPPPGDAQQPNYLPPGVQSQPPASSTASSVAPAAQPATYLPSSYGYAPPYYGVPPPAPPPTDQLPQSMANVPWASKPPAPAAEKTTTQGADAEYEKFMAEMK*

Click here to download the sequence:
Link to NCBI Protein BLAST