Transcript Information: R_Transcript_35643.p1


Annotated TAIR IDAT2G38080.1
Annotated Gene NameLaccase/Diphenol oxidase family protein
Annotated Gene Symbol(s)IRX12, LAC4, ATLMCO4, LMCO4
Annotation TypeOrtholog
Chromosome Positionchr2:15934540-15937352 | Forward length=558
E-Value5.4e-315
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.868012744777
Replicate 28.5608817163113
Replicate 312.278655477727
Condition 2: 8 Hour
Replicate 110.155824477241
Replicate 27.6632196116541
Replicate 314.51490831683
Condition 3: 24 Hour
Replicate 117.389832891284
Replicate 27.5972420783008
Replicate 310.886151891726


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35643.p1 GENE.R_Transcript_35643~~R_Transcript_35643.p1 ORF type:complete len:569 (+),score=69.64,Cu-oxidase_2|PF07731.10|2,Cu-oxidase_2|PF07731.10|4.8e+02,Cu-oxidase_2|PF07731.10|2.6e-42,Cu-oxidase|PF00394.18|3.5e+03,Cu-oxidase|PF00394.18|5.1e-42,Cu-oxidase|PF00394.18|24,Cu-oxidase_3|PF07732.11|8.4e-42,Cu-oxidase_3|PF07732.11|4.9e+03,Cu-oxidase_3|PF07732.11|3.6e+02 R_Transcript_35643:134-1840(+)
ATGGCAGTTTTGATTGAGAGAGGGTTGGTGATACTAGTGGTGGCTTGCTTATTGCCTGCATTGCTGGTTGAGTCCCGAGTTCGTCATTACAAGTTCAATGTGGTGATGAAGAATGCCACAAGAATGTGTTCAACAAAACCAATTGTAACAGTCAATGGAAAGTTCCCCGGTCCCACCATTGTGGCAAGGGAGGGTGATACGGTGCTTATTAAGGTTGTCAACCATGTCAAGTACAACGTCACAATTCATTGGCATGGAATCAGACAAATAAGGAGCGGATGGGCAGATGGACCAGCATACATAACACAATGTCCGATACAACCGGGAAAAAGCTACATTTACAATTTTACTGTGACAGGCCAAAGGGGAACCCTGTTCTGGCATGCCCATATCCTCTGGCTCAGGGCCACTGTTCATGGCGCTATTGTTATCTTGCCTAAGCTTGGTGTCCCTTATCCCTTCCCCAAACCTGACAAGGAAACCGTTGTTGTCCTAGGTGAATGGTGGAAATCTGATACGGAAGCTGTTATCAATGAAGCTCTGAAATCTGGTTTGGCACCCAACGTTTCTGACGCTCATACTATCAATGGATATCCTGGACCCGTCAAAGGCTGTGCTTCTTCACAAAAATTGTTCAACTTAGCCGTGAAACCAGGGAAGAGATACATGCTTCGTGTCGTCAACGCTGCACTGAATGAAGAGCTATTCTTCAAGATAGCCGGTCACTTACTCACAGTAGTGGAAGTCGATGCATCCTACGTGAAGCCCTTCAAGACAGAGACTATAGTGGTGGCTCCAGGCCAGACAACAAACGTGATCCTTGAGGCCAAAAACAAGACCTTAGGCAAGTACGTGGTGGTGGTTTCACCCTTTATGGATGCACCTATTGCAGTGGATAATTTCACTGGAATAGGCATAATCCGTTACTCGGGAAACAACCAATCTCCAAACGCGGCCTTAACCACCACCCTTACGGCCCCACCTCCGTTGAACGCCACCCAGGTGGCTAACAACTTCAGTGACTCCCTCCGAAGCCTCAACTCAAAGAAACACCCTGCTAAAGTCCCATTAAAAGTTGATCATTCCCTGCTTTTTACAGTTGGGTTAGGGGTCAATCCTTGCCCAACTTGCGTCAATGGCTCTAGGGTTGTTGCTGATATTAACAATGTCACCTTTGTTATGCCTTCAATTGCTCTCCTTCAAGCGCATTTCTTCAACATTAGTGGAGTTTATACTGCAGATTTTCCTGCAAAGCCCCCTGTTCCTTTCAATTATACAGACACTAGTACACAGCTTACAAGTGTTGGTTTCGGGACCTCCAAGGGGACTCGAGTTTATAGGCTTCCTTACAATGCGACGGTCCAATTGGTTCTGCAAGACACTGCACTGATAGCCCCGGAGAACCATCCCTTCCATTTGCATGGGTTTAATTTCTTCGTAGTTGGGAAAGGCGTAGGTAACTATAATCCAAACAAAGATCCTAAGAATTTTAACCTCGTCGATCCTGTTGAACGGAACACTGTCGGGGTACCTTCTGGTGGGTGGACTGCAATTAGATTCAGGGCTGATAATCCTGGGGTTTGGTTCTTGCATTGTCATTTGGAGATCCACACAACATGGGGATTGAAAATGGCATTCTTGGTGGATAATGGCAAAGGACCAAATGAATCTCTTCTACCACCTCCAAAGGATCTTCCTAAATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35643.p1 GENE.R_Transcript_35643~~R_Transcript_35643.p1 ORF type:complete len:569 (+),score=69.64,Cu-oxidase_2|PF07731.10|2,Cu-oxidase_2|PF07731.10|4.8e+02,Cu-oxidase_2|PF07731.10|2.6e-42,Cu-oxidase|PF00394.18|3.5e+03,Cu-oxidase|PF00394.18|5.1e-42,Cu-oxidase|PF00394.18|24,Cu-oxidase_3|PF07732.11|8.4e-42,Cu-oxidase_3|PF07732.11|4.9e+03,Cu-oxidase_3|PF07732.11|3.6e+02 R_Transcript_35643:134-1840(+)
MAVLIERGLVILVVACLLPALLVESRVRHYKFNVVMKNATRMCSTKPIVTVNGKFPGPTIVAREGDTVLIKVVNHVKYNVTIHWHGIRQIRSGWADGPAYITQCPIQPGKSYIYNFTVTGQRGTLFWHAHILWLRATVHGAIVILPKLGVPYPFPKPDKETVVVLGEWWKSDTEAVINEALKSGLAPNVSDAHTINGYPGPVKGCASSQKLFNLAVKPGKRYMLRVVNAALNEELFFKIAGHLLTVVEVDASYVKPFKTETIVVAPGQTTNVILEAKNKTLGKYVVVVSPFMDAPIAVDNFTGIGIIRYSGNNQSPNAALTTTLTAPPPLNATQVANNFSDSLRSLNSKKHPAKVPLKVDHSLLFTVGLGVNPCPTCVNGSRVVADINNVTFVMPSIALLQAHFFNISGVYTADFPAKPPVPFNYTDTSTQLTSVGFGTSKGTRVYRLPYNATVQLVLQDTALIAPENHPFHLHGFNFFVVGKGVGNYNPNKDPKNFNLVDPVERNTVGVPSGGWTAIRFRADNPGVWFLHCHLEIHTTWGLKMAFLVDNGKGPNESLLPPPKDLPKC*

Click here to download the sequence:
Link to NCBI Protein BLAST