Transcript Information: R_Transcript_35645.p1


Annotated TAIR IDAT2G38080.1
Annotated Gene NameLaccase/Diphenol oxidase family protein
Annotated Gene Symbol(s)IRX12, LAC4, ATLMCO4, LMCO4
Annotation TypeOrtholog
Chromosome Positionchr2:15934540-15937352 | Forward length=558
E-Value6.8E-288
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.774163788029
Replicate 211.960855439972
Replicate 311.190769513464
Condition 2: 8 Hour
Replicate 17.0391463604955
Replicate 211.594531325059
Replicate 311.076644223375
Condition 3: 24 Hour
Replicate 113.847566264329
Replicate 29.568948301732
Replicate 310.73153774772


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35645.p1 GENE.R_Transcript_35645~~R_Transcript_35645.p1 ORF type:complete len:567 (+),score=64.28,Cu-oxidase_2|PF07731.10|0.31,Cu-oxidase_2|PF07731.10|4.8e+02,Cu-oxidase_2|PF07731.10|2.6e-42,Cu-oxidase|PF00394.18|5e-42,Cu-oxidase|PF00394.18|23,Cu-oxidase_3|PF07732.11|2e-37,Cu-oxidase_3|PF07732.11|4.9e+03,Cu-oxidase_3|PF07732.11|3.6e+02 R_Transcript_35645:248-1948(+)
ATGGCACGTGAAACTTTGCTCTTTCTTGCTTGGGGTTTAGCTCTTCTGGCATCGTCGTTAGCTTCAGCAAGTATTGTGGAGCATTCGTTCATCGTAAAGAACTTAACAGTAGAAAAATTTTGCGAAAGACGAGTGATAACAGCAGTAAATGGTAGTCTACCTGGCCCACTGCTTCGTGTGAGAGAAGGCGACACTCTCATCATTCATGTCTGCAACGAATCACCTTACAACGTCACTCTTCATTGGCATGGGGTGTTTCAGAAACTAAGTGCATGGGCAGATGGTCCAGAATACATAACACAATGTCCGATACAACCGGGAAAAAGCTACATTTACAATTTTACTGTGACAGGCCAAAGGGGAACCCTGTTCTGGCATGCCCATATCCTCTGGCTCAGGGCCACTGTTCATGGCGCTATTGTTATCTTGCCTAAGCTTGGTGTCCCTTATCCCTTCCCCAAACCTGACAAGGAAACCGTTGTTGTCCTAGGTGAATGGTGGAAATCTGATACGGAAGCTGTTATCAATGAAGCTCTGAAATCTGGTTTGGCACCCAACGTTTCTGACGCTCATACTATCAATGGATATCCTGGACCCGTCAAAGGCTGTGCTTCTTCACAAAAATTGTTCAACTTAGCCGTGAAACCAGGGAAGAGATACATGCTTCGTGTCGTCAACGCTGCACTGAATGAAGAGCTATTCTTCAAGATAGCCGGTCACTTACTCACAGTAGTGGAAGTCGATGCATCCTACGTGAAGCCCTTCAAGACAGAGACTATAGTGGTGGCTCCAGGCCAGACAACAAACGTGATCCTTGAGGCCAAAAACAAGACCTTAGGCAAGTACGTGGTGGTGGTTTCACCCTTTATGGATGCACCTATTGCAGTGGATAATTTCACTGGAATAGGCATAATCCGTTACTCGGGAAACAACCAATCTCCAAACGCGGCCTTAACCACCACCCTTACGGCCCCACCTCCGTTGAACGCCACCCAGGTGGCTAACAACTTCAGTGACTCCCTTCGAAGCCTCAACTCGAAGAAATACCCTGCTAAAGTCCCATTACAAGTTGATCATTCCCTGCTTTTTACAGTTGGGTTAGGGGTCAATCCTTGCCCAACTTGCGTCAATGGCTCTAGGGTTGTTGCTGATATTAACAATGTCACCTTTGTTATGCCTTCAATTGCTCTCCTTCAAGCGCATTTCTTCAACATTAGTGGAGTTTATACTGCAGATTTTCCTGCAAAGCCCCCTGTTCCTTTCAATTATACAGACACTAGTACACAGCTTACAAGTGTTGGTTTCGGGACCTCCAAGGGGACTCGAGTTTATAGGCTTCCTTACAATGCGACGGTCCAATTGGTTCTGCAAGACACTGCACTGATAGCCCCGGAGAACCATCCCTTCCATTTGCATGGGTTTAATTTCTTCGTAGTTGGGAAAGGCGTAGGTAACTATAATCCAAACAAAGATCCTAAGAATTTTAACCTCGTCGATCCTGTTGAACGGAACACTGTCGGGGTACCTTCTGGTGGGTGGACTGCAATTAGATTCAGGGCTGATAATCCTGGGGTTTGGTTCTTGCATTGTCATTTGGAGATCCACACAACATGGGGATTGAAAATGGCATTCTTGGTGGATAATGGCAAAGGACCAAATGAATCTCTTCTACCACCTCCAAAGGATCTTCCTAAATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35645.p1 GENE.R_Transcript_35645~~R_Transcript_35645.p1 ORF type:complete len:567 (+),score=64.28,Cu-oxidase_2|PF07731.10|0.31,Cu-oxidase_2|PF07731.10|4.8e+02,Cu-oxidase_2|PF07731.10|2.6e-42,Cu-oxidase|PF00394.18|5e-42,Cu-oxidase|PF00394.18|23,Cu-oxidase_3|PF07732.11|2e-37,Cu-oxidase_3|PF07732.11|4.9e+03,Cu-oxidase_3|PF07732.11|3.6e+02 R_Transcript_35645:248-1948(+)
MARETLLFLAWGLALLASSLASASIVEHSFIVKNLTVEKFCERRVITAVNGSLPGPLLRVREGDTLIIHVCNESPYNVTLHWHGVFQKLSAWADGPEYITQCPIQPGKSYIYNFTVTGQRGTLFWHAHILWLRATVHGAIVILPKLGVPYPFPKPDKETVVVLGEWWKSDTEAVINEALKSGLAPNVSDAHTINGYPGPVKGCASSQKLFNLAVKPGKRYMLRVVNAALNEELFFKIAGHLLTVVEVDASYVKPFKTETIVVAPGQTTNVILEAKNKTLGKYVVVVSPFMDAPIAVDNFTGIGIIRYSGNNQSPNAALTTTLTAPPPLNATQVANNFSDSLRSLNSKKYPAKVPLQVDHSLLFTVGLGVNPCPTCVNGSRVVADINNVTFVMPSIALLQAHFFNISGVYTADFPAKPPVPFNYTDTSTQLTSVGFGTSKGTRVYRLPYNATVQLVLQDTALIAPENHPFHLHGFNFFVVGKGVGNYNPNKDPKNFNLVDPVERNTVGVPSGGWTAIRFRADNPGVWFLHCHLEIHTTWGLKMAFLVDNGKGPNESLLPPPKDLPKC*

Click here to download the sequence:
Link to NCBI Protein BLAST