Transcript Information: R_Transcript_356618.p2


Annotated TAIR IDATMG01360.1
Annotated Gene Namecytochrome oxidase
Annotated Gene Symbol(s)COX1
Annotation TypeOrtholog
Chromosome PositionchrM:349830-351413 | Reverse length=527
E-Value3.5E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21601137224519
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.21481196000458
Condition 3: 24 Hour
Replicate 10.27169002636336
Replicate 20
Replicate 30.2590260909692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_356618.p2 GENE.R_Transcript_356618~~R_Transcript_356618.p2 ORF type:5prime_partial len:169 (+),score=-26.85,COX1|PF00115.16|1.1e-40 R_Transcript_356618:2-508(+)
CTGTTCACCGTTGGTGGTGTGACGGGCGTTCAGCTCGCCAATGCCGGTCTCGACCGCGCGGTACATGACACCTATTACGTCGTGGCGCACTTCCACTACGTTCTGTCGCTCGGCGCCGTCTTCGCCATCTTCGCAGCCTGGTACTACTGGTTCCCGAAGATGACTGGCTACATGTACAGTGAAACGCTGGGCAACCTGCATTTCTTCATCATGTTCGTCGGCGTGAACATGGTCTTCTTCCCGCAGCACTTCCTCGGCCTTGCCGGCATGCCGCGCCGCTACATCGACTATCCGGATGCATTCGCCGGCTGGAACTATGTCTCGTCGGTTGGCTCCTACATCTCGGCCTTCGGCGTGCTCGTCTTCTTCGTCTGCGTCATCGAGGCGTTCATGAAGAAGCGCGTGGCGGGCGACAATCCCTGGGGCGTTGGTGCCGATACGCTGGAATGGCAGCTGTCTTCGCCGCCGCCGACCCACCAGTGGGAACAGCTGCCGCGCATCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_356618.p2 GENE.R_Transcript_356618~~R_Transcript_356618.p2 ORF type:5prime_partial len:169 (+),score=-26.85,COX1|PF00115.16|1.1e-40 R_Transcript_356618:2-508(+)
LFTVGGVTGVQLANAGLDRAVHDTYYVVAHFHYVLSLGAVFAIFAAWYYWFPKMTGYMYSETLGNLHFFIMFVGVNMVFFPQHFLGLAGMPRRYIDYPDAFAGWNYVSSVGSYISAFGVLVFFVCVIEAFMKKRVAGDNPWGVGADTLEWQLSSPPPTHQWEQLPRIK*

Click here to download the sequence:
Link to NCBI Protein BLAST