Transcript Information: R_Transcript_35683.p1


Annotated TAIR IDAT1G02560.1
Annotated Gene Namenuclear encoded CLP protease 5
Annotated Gene Symbol(s)CLPP5, NCLPP5, NCLPP1
Annotation TypeOrtholog
Chromosome Positionchr1:538000-539805 | Forward length=298
E-Value1.5E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.237802784596
Replicate 249.389024842883
Replicate 351.453391645903
Condition 2: 8 Hour
Replicate 154.0729517585
Replicate 258.612614523108
Replicate 364.011929877198
Condition 3: 24 Hour
Replicate 167.569000817902
Replicate 262.991156073846
Replicate 364.834034337703


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35683.p1 GENE.R_Transcript_35683~~R_Transcript_35683.p1 ORF type:5prime_partial len:264 (+),score=64.36,CLP_protease|PF00574.19|4.8e-80 R_Transcript_35683:1-792(+)
CACTTTCTCTCTCTTCCTTTCAAACCCCTCTCTCTCTCTCCCAGGGTTTTGAGAGCTCGTCGAAGCTCCAAAGTCAAAGCTCTTTACTCCGATGGATTTGGCACTACTCGCTCCGGCATTTGGTCCATCAGAGATGATTTGGCGGTGCCATCTTCGCCCTACTTTCCTGCTTATGCGCAAGGGCAAGGACCCCCACCTATGGTTCAAGAGAGGTTCCAGAGTGTCATTACTCAGCTCTTTCAATATAGAATTATTCGATGTGGTGGAGCAGTCGATGATGATATGGCTAACATAATTGTGGCTCAACTTCTCTATCTTGATGCTGTTGATCCTACCAAGGACATTGTCATGTATGTGAATTCACCTGGAGGGTCAGTTACAGCTGGTATGGCAATATTTGACACCATGAGGCACATTCGGCCTGATGTCTCCACTGTTTGTGTTGGACTGGCAGCAAGTATGGGTGCTTTCCTTCTTAGTGCTGGCACCAAAGGGAAAAGGTATAGCTTGCCTAATTCAAGGATTATGATCCATCAACCTCTGGGTGGTGCACAGGGTGGTCAAACAGATATAGACATTCAGGCAAATGAGATGCTCCACCACAAGGCTAACCTCAATGGGTATCTGGCTTACCACACTGGTCAGAGCCTGGAGAAGATCAACCAAGACACTGACCGTGACTTCTTCATGAGTGCTAAAGAAGCCAAAGAGTATGGCCTCATTGATGGTGTCATCATGAACCCACTAAAAGCTCTACAGCCACTAGCTGCCACTGCTGATCAGGCATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35683.p1 GENE.R_Transcript_35683~~R_Transcript_35683.p1 ORF type:5prime_partial len:264 (+),score=64.36,CLP_protease|PF00574.19|4.8e-80 R_Transcript_35683:1-792(+)
HFLSLPFKPLSLSPRVLRARRSSKVKALYSDGFGTTRSGIWSIRDDLAVPSSPYFPAYAQGQGPPPMVQERFQSVITQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAATADQAS*

Click here to download the sequence:
Link to NCBI Protein BLAST