Transcript Information: R_Transcript_357082.p1


Annotated TAIR IDAT3G01180.1
Annotated Gene Namestarch synthase 2
Annotated Gene Symbol(s)AtSS2, SS2
Annotation TypeOrtholog
Chromosome Positionchr3:62456-65678 | Reverse length=792
E-Value2.8E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0140533863733
Replicate 20.1944101890398
Replicate 31.060497110933
Condition 2: 8 Hour
Replicate 10.90688388693501
Replicate 20.8281808089328
Replicate 31.176493280951
Condition 3: 24 Hour
Replicate 10.21257228914541
Replicate 20.40843072019588
Replicate 30.81065572914435


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_357082.p1 GENE.R_Transcript_357082~~R_Transcript_357082.p1 ORF type:5prime_partial len:108 (+),score=13.68,Glyco_transf_5|PF08323.7|6e-11 R_Transcript_357082:1-324(+)
TTGGCTCGGCGTGGGCATAGAGTAATGGTTGTGGCACCTCGATATGGAGAATATGCTGAGACTCAAGAGACGGGAGTCAGGAGGAGATACAAAGTTGACGGCCAGGATATGGAAGTATGTTACCTTCAGACGTATATAGATGGTGTGGACTTTGTATTTGTTGACAGCCCTATATTTCGCCATATTGGGAATAACATATATGCGGGAAGCAGACTGGATGTTCTGAAACGAATGATTCTCTTCTGCAAGGTTGCAGTTGAGAATAGAACCCTGTATGTAGCTGTGATATGGATTTCTCTATCTCAGGCAGATTTAGACAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_357082.p1 GENE.R_Transcript_357082~~R_Transcript_357082.p1 ORF type:5prime_partial len:108 (+),score=13.68,Glyco_transf_5|PF08323.7|6e-11 R_Transcript_357082:1-324(+)
LARRGHRVMVVAPRYGEYAETQETGVRRRYKVDGQDMEVCYLQTYIDGVDFVFVDSPIFRHIGNNIYAGSRLDVLKRMILFCKVAVENRTLYVAVIWISLSQADLDK*

Click here to download the sequence:
Link to NCBI Protein BLAST