Transcript Information: R_Transcript_357539.p1


Annotated TAIR IDAT5G58420.1
Annotated Gene NameRibosomal protein S4 (RPS4A) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23619599-23620896 | Forward length=262
E-Value7.1E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1104462938232
Replicate 21.0378399445318
Replicate 30.95807647740561
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_357539.p1 GENE.R_Transcript_357539~~R_Transcript_357539.p1 ORF type:5prime_partial len:263 (+),score=33.52,Ribosomal_S4e|PF00900.16|4.3e-32,40S_S4_C|PF16121.1|5e-20,RS4NT|PF08071.8|5.6e-20,S4|PF01479.21|1.6e-07 R_Transcript_357539:1-789(+)
GGTCCAAAGAAGCACTTGAAGCGTTTAAATGCGCCAAAGCACTGGATGCTTTCCAAGATGGACGGAATCTGGGCTCCTCGTCCATCCCAAGGCCCTCACAAGCTCCGTGAATCCCTCCCTCTCATCTTAATCTTAAGAAACAGATTAAAGTATGCTTTAACTGGTAAAGAGACCAAGATGATCTGTGTCGAGCGTAACGTTCTTGTTGATGGCAAGATCCGCACCGATCCTAACTACCCTGCTGGTTTCATGGACGTCGTTGAGCTCCCAAAGTCCAACGATCAATTCAGATTAATCTATGACACCAAAGGTCGCTATGTCTTACACAGAATCTCTGATGAAGAGAAGAAGTTTAAGTTAGCTAAGGTCAAGAAGCAAGAATTAACCAAGAAGAAGATCCCATACGTTGTCACCCATGACGGCAGAACCATCCGTTACCCTGATCCAGCCATTAAGGTCGATGATGTTGTCAAGGTTGACATCGCCACTGGTAAAATCGTCGACTTCATCAAGTTCGAGACTGGTAAATTAGCTATGATCACTAAGGGACGTAACACTGGTCGTGTCGGTACCGTTCTTCACGTCGAGAGACATCCTGGTGCCTTCGATATTGTCACTGTCCGTGATGCCACCGGAAACACCTTCTCCACCAGACAAGAGAACGTCTTCATCATCGGAAACGGAAGTGAGTCAGCTGTTTCCTTACCAAAGGGAAACGGTGTCAAGATCTCCATCATTGAGGAAAGAGAGAAGATCATGAGCAACAGAAAGTCCGCCGGCAGTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_357539.p1 GENE.R_Transcript_357539~~R_Transcript_357539.p1 ORF type:5prime_partial len:263 (+),score=33.52,Ribosomal_S4e|PF00900.16|4.3e-32,40S_S4_C|PF16121.1|5e-20,RS4NT|PF08071.8|5.6e-20,S4|PF01479.21|1.6e-07 R_Transcript_357539:1-789(+)
GPKKHLKRLNAPKHWMLSKMDGIWAPRPSQGPHKLRESLPLILILRNRLKYALTGKETKMICVERNVLVDGKIRTDPNYPAGFMDVVELPKSNDQFRLIYDTKGRYVLHRISDEEKKFKLAKVKKQELTKKKIPYVVTHDGRTIRYPDPAIKVDDVVKVDIATGKIVDFIKFETGKLAMITKGRNTGRVGTVLHVERHPGAFDIVTVRDATGNTFSTRQENVFIIGNGSESAVSLPKGNGVKISIIEEREKIMSNRKSAGSA*

Click here to download the sequence:
Link to NCBI Protein BLAST