Transcript Information: R_Transcript_358078.p1


Annotated TAIR IDAT1G67960.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25480808-25484176 | Reverse length=624
E-Value1E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6848887035125
Replicate 20.75371334827737
Replicate 32.3494089842208
Condition 2: 8 Hour
Replicate 11.381253920101
Replicate 21.7200678339374
Replicate 31.5824481053671
Condition 3: 24 Hour
Replicate 13.2965056532088
Replicate 21.5834544844517
Replicate 31.9081588701398


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_358078.p1 GENE.R_Transcript_358078~~R_Transcript_358078.p1 ORF type:internal len:195 (-),score=27.37 R_Transcript_358078:3-584(-)
GTTCAGTCCACATCTCAGAGTTGCGCTCAGAGTTTCGTGCAACAGGAGAGTGGTGTCAGTACAGTATGTCAGGTCTTGTATGGCGGTGAATTGCGGCAGAGAACAATTAATGGTGTGGTTTCCGAAGAATCAAAGTCACAGTCACAGTTACCGCCGGTCATAGAAAATGAAAAGGAAAGGGAAAAAGAAAATTTAAGAGAGGAGGTAATTTCGAGACCTAATCAAAATACGAATGGCAGGCTGGAGACTGCTGAGTCCTTAGATTGGAAACGCTTCACGGCAGATGATGCTACCTATCCTTCGCCCATGGAGAATTCACCGATAAAGTACTTCATGGAAGAAATTGATAGTGGATATGCACTAAGGAGCACAACAACACTGGGGAATGAGAAAGAACGAGAGAGAGTCTATGATACTATCTTCCGCTTGCCTTGGAGGTGTGAGCTGCTTATTGATGTTGGCTTCTTCGTCTGTTTCAATTCATTTTTATCATTGCTAACAATCATTCCAATGAGAGCTCTAATGACATTATGGAGATTCTTCATTGGAAGCTCAAAAAGCCTTCTTCTGCGGAGCTGTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_358078.p1 GENE.R_Transcript_358078~~R_Transcript_358078.p1 ORF type:internal len:195 (-),score=27.37 R_Transcript_358078:3-584(-)
VQSTSQSCAQSFVQQESGVSTVCQVLYGGELRQRTINGVVSEESKSQSQLPPVIENEKEREKENLREEVISRPNQNTNGRLETAESLDWKRFTADDATYPSPMENSPIKYFMEEIDSGYALRSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCFNSFLSLLTIIPMRALMTLWRFFIGSSKSLLLRSCQ

Click here to download the sequence:
Link to NCBI Protein BLAST