Transcript Information: R_Transcript_358233.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26453566601042
Replicate 20.91288262679557
Replicate 30.66396340858413
Condition 2: 8 Hour
Replicate 10
Replicate 20.32407075132153
Replicate 30.13153341029266
Condition 3: 24 Hour
Replicate 10.99816553163931
Replicate 20
Replicate 31.1102458899151


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_358233.p1 GENE.R_Transcript_358233~~R_Transcript_358233.p1 ORF type:5prime_partial len:138 (+),score=21.74,RVT_1|PF00078.23|3.8e-06 R_Transcript_358233:1-414(+)
CTGCGACAGGGGAATCTGCTGTCTCCTGTCCTCTTTACGCTAGTGGTGGATGTCCTGAGTCGGATGTCGGAGAGGGCCGTAGATAGAGGGGTGATTGTTGGTTTCTCCGTTGGGAGGGAGGGTGTTATGGTTTCCCATTTACAGTTTGACGATACCATTCTTTTCCTAGAAGTTGACTTTGGGAATTTCAAGAATGTGTTGACTATTCTGCCACTTTTTGAGGCAATTTCCGGGATGCGGATTAATCTTGGGAAATGTAGTGTGGCTGGGGTGAATGTAGGTAACGAGGAGCTTGTGGGTTTTGCTGAGATGGTGGGGTGTCAGATTCAGGGGTGGCCCCTGTCCTACTTGGGAGTCCCTCTTGGTGGCAACCCACGGGCTGTTTCTTTCTGGATCCCGTGGTTGATCGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_358233.p1 GENE.R_Transcript_358233~~R_Transcript_358233.p1 ORF type:5prime_partial len:138 (+),score=21.74,RVT_1|PF00078.23|3.8e-06 R_Transcript_358233:1-414(+)
LRQGNLLSPVLFTLVVDVLSRMSERAVDRGVIVGFSVGREGVMVSHLQFDDTILFLEVDFGNFKNVLTILPLFEAISGMRINLGKCSVAGVNVGNEELVGFAEMVGCQIQGWPLSYLGVPLGGNPRAVSFWIPWLIG*

Click here to download the sequence:
Link to NCBI Protein BLAST