Transcript Information: R_Transcript_35846.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value4.2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.187764289784
Replicate 212.597780249779
Replicate 312.197837769951
Condition 2: 8 Hour
Replicate 111.99807382415
Replicate 212.913409263285
Replicate 315.610385133533
Condition 3: 24 Hour
Replicate 112.684188493307
Replicate 212.130392389817
Replicate 311.436325698904


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35846.p1 GENE.R_Transcript_35846~~R_Transcript_35846.p1 ORF type:complete len:400 (+),score=86.81,Myb_DNA-bind_3|PF12776.3|2.2e-28 R_Transcript_35846:290-1489(+)
ATGGAGAGGCATAATGGACCAGTGATAAGAGGTAAAAAGCTATGGTCACCTGAAATGCATGAATACTTTGTCGATTTATGTGTGCGAGAGACATTAAATGGTAATAAGCCTGGACCATCTTTCAATAGAGATGGATGGAATAATGTTCTTGAAGCATTGAATAAGAAACCGAACTTCAACATTGACAAGAAACAGTTGAAGAACCACTGGGATTTAACTAGACAGAAATGGAAGGCCTGGTGCAAGCTACTAGGCACGAGCAACATGAAATGGGAACCTACTACTCAAAAATTTGGTGCTAGTCAAGAAGATTGGGCTAATTATATTAAGTTCAACCCTGAAGCTGCTATATTTCAATACAAGGAGCTTGAGTTTGTTGACAAATTGGAAATAGTTTTTCCCGGGATAACCCCTGCCACTGAAGCTGAAGTTACAGAACCTGCTGCTCAGCGTAGGAAACTTGATGACAGTCCCAGCAACTTGCTCTTGTGTACAGAGGACAGGGATAAAGAAGAATCACAAATATTGCCACCCGAGAGGATGGAGCAGTCTGAGACTTTGGAATTCAAGCCGAGATACATACAGCCCAAACGGATCGAGCATCGTTTTGAGGGTGTTGAATTAAGGCCAAGAGACTTGCAGCCCAAAAGGATTGATCATCTATATGAGGTTGTTGAACTGAGGCCTAAGGAAATACAACCAAAGAGGATTGAGCGCCTATGTGAGTCTGTTGAATTGTGTCCATTTGGCACACCACCTAAAAGGGTTGATCATCTATACGAGGCTGTTGAATTGAGGCCCAAGGACATTCAGCCAAAGAGTATTGAGCATGGACGTGAGCCCACTGAATTAAGTCCCTTGTACACACAGCCCAATGAGCTTGAGCGTCCATGTGATGCCCTCGAATCAAGGCATAGAGATGCACAGCCAGAGAAGGTTGACCAGCGTCAATGTGATACCGTGGAGTCAAGGAGTGCCATGACAATTCAATCTAAGGGGGGAGACAGAATTTACAGTATTGGTGAATGCATCGAGTGCTTGGATGGGATGGAGGACATAGAGCAAGGAGGCGAGCTTTACTTGTTTGCCTTGGACGTTTTCTTGAGAAAGGAATACAGGGAAATTTTTCTTCAACTTAAGAAGCCTGCTGTAAAGATTGCATGGTTGAAAAGGCTGCAATCAATAGGTTTGTCTCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35846.p1 GENE.R_Transcript_35846~~R_Transcript_35846.p1 ORF type:complete len:400 (+),score=86.81,Myb_DNA-bind_3|PF12776.3|2.2e-28 R_Transcript_35846:290-1489(+)
MERHNGPVIRGKKLWSPEMHEYFVDLCVRETLNGNKPGPSFNRDGWNNVLEALNKKPNFNIDKKQLKNHWDLTRQKWKAWCKLLGTSNMKWEPTTQKFGASQEDWANYIKFNPEAAIFQYKELEFVDKLEIVFPGITPATEAEVTEPAAQRRKLDDSPSNLLLCTEDRDKEESQILPPERMEQSETLEFKPRYIQPKRIEHRFEGVELRPRDLQPKRIDHLYEVVELRPKEIQPKRIERLCESVELCPFGTPPKRVDHLYEAVELRPKDIQPKSIEHGREPTELSPLYTQPNELERPCDALESRHRDAQPEKVDQRQCDTVESRSAMTIQSKGGDRIYSIGECIECLDGMEDIEQGGELYLFALDVFLRKEYREIFLQLKKPAVKIAWLKRLQSIGLSP*

Click here to download the sequence:
Link to NCBI Protein BLAST