Transcript Information: R_Transcript_35849.p2


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value4E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7383772337827
Replicate 20.74986787201064
Replicate 30.54539851419411
Condition 2: 8 Hour
Replicate 10.29149839222911
Replicate 21.3310048714991
Replicate 31.9448154236129
Condition 3: 24 Hour
Replicate 11.093228915605
Replicate 21.312813029201
Replicate 31.5634074776355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35849.p2 GENE.R_Transcript_35849~~R_Transcript_35849.p2 ORF type:complete len:84 (+),score=16.85,Myb_DNA-bind_3|PF12776.3|5e-18 R_Transcript_35849:287-538(+)
ATGGAGAGGCATAATGGACCAGTGATAAGAGGTAAAAAGCTATGGTCACCTGAAATGCATGAATTCTTTGTCGATTTATGTGTGCAAGAGAATTTAAATGGTAATAAGCCTGGACTATCTTTCAATAGAGATGGTTGGAGTAATGTTCTTGAAGCATTGAATAAGAAACCGAACTTCAACATTGACAAGAAACAGTTGAAGAACCACTGGGATTTAACTAGACAGAAATGGAAGGCCGGTGCAAGCTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35849.p2 GENE.R_Transcript_35849~~R_Transcript_35849.p2 ORF type:complete len:84 (+),score=16.85,Myb_DNA-bind_3|PF12776.3|5e-18 R_Transcript_35849:287-538(+)
MERHNGPVIRGKKLWSPEMHEFFVDLCVQENLNGNKPGLSFNRDGWSNVLEALNKKPNFNIDKKQLKNHWDLTRQKWKAGASY*

Click here to download the sequence:
Link to NCBI Protein BLAST