Transcript Information: R_Transcript_35850.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value3E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4890401301889
Replicate 21.7178791249698
Replicate 31.6659445524475
Condition 2: 8 Hour
Replicate 11.7807901779815
Replicate 22.9136906641545
Replicate 32.8052489140598
Condition 3: 24 Hour
Replicate 11.8783660459031
Replicate 21.8713552998066
Replicate 31.3928539346207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35850.p1 GENE.R_Transcript_35850~~R_Transcript_35850.p1 ORF type:complete len:330 (+),score=59.06,Myb_DNA-bind_3|PF12776.3|1.5e-28 R_Transcript_35850:290-1279(+)
ATGGAGAGGCATAATGGACCAGTGATAAGAGGTAAAAAGCTATGGTCACCTGAAATGCATGAATACTTTGTCGATTTATGTGTGCGAGAGACATTAAATGGTAATAAGCCTGGACCATCTTTCAATAGAGATGGATGGAATAATGTTCTTGAAGCATTGAATAAGAAACCGAACTTCAACATTGACAAGAAACAGTTGAAGAACCACTGGGATTTAACTAGACAGAAATGGAAGGCCTGGTGCAAGCTACTAGGCACGAGCAACATGAAATGGGAACCTACTACTCAAAAATTTGGTGCTAGTCAAGAAGATTGGGCTAATTATATTAAGTTCAACCCTGAAGCTGCTATATTTCAATACAAGGAGCTTGAGTTTGTTGACAGATTGGAAATAGTTTTTACGGGGATAACCTCTGCCACTGAAGCAGAACTTTCGGAACCTGCTGGTCAGCGTAGGAAACTTGATGACAGTCACGCCAACTTACTCTTGCATACAGAGGACAGGGATAAAAAAGAATCTCAAATATTGCTGCCCGAGAGGATGGGGCAGTCTGACACTTTAGAGTTGAAGCCGAGATACATACAGCCCAAACGGACCGAGCATCGTTTTAAGGGTGTTGAATTAAGGCCAGGAGACTTGCAGCCCAAAAGGATTGATCATCTATATGAGGTTGTTGAACTGAGGCCAAGGGAAATACAACCAAAGAGAATTGAGTGCCTATGTGAGCCTGTTGAATTGAGTCCGTTTGGTACACCACATAGAAGGGTGGATCATCTATACGAGGCTGTTGAATTGAGGCCCAAGGACATTCAGCTCAAGAGTATTGAGCATGTAGGTGAGCCCACTGAATTAAGTCCCTTGGACCCACAGCCCAAGGAGCTTGAGGGTCCATGTGATACCCTCGAATCAAGGCATAGAGACACAATTACACACAGCCAGAGAAGGTTGATCAGCGTCAATGTGACACCGTGGAGTCAAGGAGTGTCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35850.p1 GENE.R_Transcript_35850~~R_Transcript_35850.p1 ORF type:complete len:330 (+),score=59.06,Myb_DNA-bind_3|PF12776.3|1.5e-28 R_Transcript_35850:290-1279(+)
MERHNGPVIRGKKLWSPEMHEYFVDLCVRETLNGNKPGPSFNRDGWNNVLEALNKKPNFNIDKKQLKNHWDLTRQKWKAWCKLLGTSNMKWEPTTQKFGASQEDWANYIKFNPEAAIFQYKELEFVDRLEIVFTGITSATEAELSEPAGQRRKLDDSHANLLLHTEDRDKKESQILLPERMGQSDTLELKPRYIQPKRTEHRFKGVELRPGDLQPKRIDHLYEVVELRPREIQPKRIECLCEPVELSPFGTPHRRVDHLYEAVELRPKDIQLKSIEHVGEPTELSPLDPQPKELEGPCDTLESRHRDTITHSQRRLISVNVTPWSQGVS*

Click here to download the sequence:
Link to NCBI Protein BLAST