Transcript Information: R_Transcript_358731.p1


Annotated TAIR IDAT5G06860.1
Annotated Gene Namepolygalacturonase inhibiting protein 1
Annotated Gene Symbol(s)PGIP1, ATPGIP1
Annotation TypeHomolog
Chromosome Positionchr5:2132373-2133434 | Forward length=330
E-Value1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67106474098231
Replicate 20.46315368565363
Replicate 31.5158870468042
Condition 2: 8 Hour
Replicate 11.6203881215089
Replicate 21.4797642394902
Replicate 31.334677251499
Condition 3: 24 Hour
Replicate 11.0128444365164
Replicate 20.81085510627122
Replicate 31.126573035355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_358731.p1 GENE.R_Transcript_358731~~R_Transcript_358731.p1 ORF type:internal len:136 (+),score=-3.43,LRR_8|PF13855.2|6.3e-06,LRR_8|PF13855.2|28,LRR_8|PF13855.2|77 R_Transcript_358731:3-407(+)
CCTATACCAAAGTTTATTGGATGTTTACACAATTTGAGAGGCCTTCACCTGTCAAGTAACAAGTTTAATGGTTCAATTCCATCGTCTCTTGGCCGGTTGGCTAAACTAGTTGCTCTCAGTCTTTCACAAAACCAGCTTACTGGTCGGATCCCAGAGATCTGCGGGTTGTTACCAGATTCGATATCACTCTGGCTCGATAATAACCGATTAACAGGAACCCTGCCCAAGTCGATGGCCCGATTTAGTCCGTTGTTTTTGCAACTTAACAACAATAGTTTAATAGGAGACGCCTCGCTTTTGTTTGGGTATGAGAAATCCTCGATGGAGATAGTTAACCTTAGTAACAATCGTTTCAAGTTTAATTTCTCAAACGTGGAACTCCCTAGAAATATGAGGAGCCTTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_358731.p1 GENE.R_Transcript_358731~~R_Transcript_358731.p1 ORF type:internal len:136 (+),score=-3.43,LRR_8|PF13855.2|6.3e-06,LRR_8|PF13855.2|28,LRR_8|PF13855.2|77 R_Transcript_358731:3-407(+)
PIPKFIGCLHNLRGLHLSSNKFNGSIPSSLGRLAKLVALSLSQNQLTGRIPEICGLLPDSISLWLDNNRLTGTLPKSMARFSPLFLQLNNNSLIGDASLLFGYEKSSMEIVNLSNNRFKFNFSNVELPRNMRSLK

Click here to download the sequence:
Link to NCBI Protein BLAST