Transcript Information: R_Transcript_358893.p1


Annotated TAIR IDAT4G18060.1
Annotated Gene NameSH3 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10027668-10029662 | Reverse length=351
E-Value3.7E-189
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.619066188768
Replicate 214.258232660925
Replicate 318.377898357945
Condition 2: 8 Hour
Replicate 113.751374010487
Replicate 217.235178267275
Replicate 318.619703730941
Condition 3: 24 Hour
Replicate 122.497335449498
Replicate 221.739280969509
Replicate 317.685767110903


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_358893.p1 GENE.R_Transcript_358893~~R_Transcript_358893.p1 ORF type:complete len:349 (+),score=99.93,SH3_9|PF14604.2|2.8e-10,SH3_1|PF00018.24|3.1e-09,SH3_2|PF07653.13|1.7e-07 R_Transcript_358893:224-1270(+)
ATGGAAAGTCTCAGAAAACAAGCCAGTAAACTAAGAGATCAAGTTGCTAAGCAGCAACAGGCTGTTATAAAGCACATCAGTGGATCTGGCTATGAAAGCTCTGAAGTTATGGTCATTGATGAAGTTGAGCTGCAGAGACATCAACAACTAGACAAATTATACAGATCAACTCGTTCTGGAAGGGATTTCCAGAAAGAGATTGTTAAAGCTGCAGAAACGTTTACTACTATTGGATATAGAAAGGTTGAAGCAGGTACTAAATTGTCTGAGGAGTGTTGCAAATATGGTTCTGAGAATATTGAAGATAGCATTTTAGCCAAGGCTTCATCTATATATGGTGATGCTCGCAAACACGTGGAGAAGGAACAAGAAGAGTTGAATAGATTGTTATTATCTCAGATATTGGATCCCTTGAGGCAAATGATTACCGGTACCCCTCTAGAAGATGCTCGTCATCTTGCACAACGTTATAGTCGAATGCGACAAGAAGCAGAGGCGCAGGCAGCTGAGGTTTCCCGAAGACGAGCACGAGTAAGGGAGGCAACAACTCATGAAAATACAGCAAAGCTACAAGCAGTGGAAGCCAAAATGCAGGAGCTAAAAGCTAATATGGCAGTTTTAGGCAAAGAGGCAGCAGCTGCACTATCTGCTGTCGAATCACAGCAACAGAGATTGACATTTCAGAGGCTTGTATCATTGGTTGAAGGGGAAAAGAATTACCACCTAAGAGTAGCAACTATTCTTAATGAGGTTGAAGCTGAGATGGTGTCTGAGAAGCAGCAGAAAGAAGCCACTCCTCCTGCCCTTTCAATAGAGAATAATCCAGAGAAAACAATGTACTACTTGGCTGAAGCAACTCATGCATTCTACGCTGAATCTGAGAAAGAGCTGAGCCTTGCAGTTGGTGATTTTGTTGTTGTTCGCAAGGTAAGCCCATCTGGTTGGTCTGAAGGGGAATGCAAGGGAAAATCTGGCTGGTTTCCATCAGCATACGTCGAAAAGCGTCAGAGGATCCCAGCTAGAAACACAGCTGCAGAGGTATACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_358893.p1 GENE.R_Transcript_358893~~R_Transcript_358893.p1 ORF type:complete len:349 (+),score=99.93,SH3_9|PF14604.2|2.8e-10,SH3_1|PF00018.24|3.1e-09,SH3_2|PF07653.13|1.7e-07 R_Transcript_358893:224-1270(+)
MESLRKQASKLRDQVAKQQQAVIKHISGSGYESSEVMVIDEVELQRHQQLDKLYRSTRSGRDFQKEIVKAAETFTTIGYRKVEAGTKLSEECCKYGSENIEDSILAKASSIYGDARKHVEKEQEELNRLLLSQILDPLRQMITGTPLEDARHLAQRYSRMRQEAEAQAAEVSRRRARVREATTHENTAKLQAVEAKMQELKANMAVLGKEAAAALSAVESQQQRLTFQRLVSLVEGEKNYHLRVATILNEVEAEMVSEKQQKEATPPALSIENNPEKTMYYLAEATHAFYAESEKELSLAVGDFVVVRKVSPSGWSEGECKGKSGWFPSAYVEKRQRIPARNTAAEVY*

Click here to download the sequence:
Link to NCBI Protein BLAST