Transcript Information: R_Transcript_359508.p1


Annotated TAIR IDAT5G40400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16166444-16168276 | Forward length=610
E-Value9E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38836087137699
Replicate 20
Replicate 30.24368869783141
Condition 2: 8 Hour
Replicate 10.52097584994139
Replicate 20.23788172171474
Replicate 30.19310224064241
Condition 3: 24 Hour
Replicate 10
Replicate 20.46926082745909
Replicate 30.46569584440207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_359508.p1 GENE.R_Transcript_359508~~R_Transcript_359508.p1 ORF type:internal len:94 (+),score=18.99,PPR_2|PF13041.2|7.3e-07,PPR_2|PF13041.2|0.0022,PPR_2|PF13041.2|18,PPR|PF01535.16|0.046,PPR|PF01535.16|0.002,PPR|PF01535.16|0.13,PPR_3|PF13812.2|0.82,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.029,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.0044,PPR_1|PF12854.3|27 R_Transcript_359508:2-280(+)
TGCAAAGAAGGAAGGATGAAAGAAGTTAGGCTCTTAGTTCATGAGATGATTGGAAATGGGATAAAACCTGATGATTTTACTTGTCAGGTTCTCGTGGAAGGATATGGGAGATCTGGTCGTTGGCATTCATGCTTGAATATGATTGTTGAACTTAAGAGATTTGGGTTTCCGATTTCCAGTGATACATATAAGTATTTGATTGTTTCTTTGGCTCAGGGGAACCATCCATTTGTAGCTGCTAAGCTCTTAGATAGAATGCTAGAAGAAGGTCGCGAGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_359508.p1 GENE.R_Transcript_359508~~R_Transcript_359508.p1 ORF type:internal len:94 (+),score=18.99,PPR_2|PF13041.2|7.3e-07,PPR_2|PF13041.2|0.0022,PPR_2|PF13041.2|18,PPR|PF01535.16|0.046,PPR|PF01535.16|0.002,PPR|PF01535.16|0.13,PPR_3|PF13812.2|0.82,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.029,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.0044,PPR_1|PF12854.3|27 R_Transcript_359508:2-280(+)
CKEGRMKEVRLLVHEMIGNGIKPDDFTCQVLVEGYGRSGRWHSCLNMIVELKRFGFPISSDTYKYLIVSLAQGNHPFVAAKLLDRMLEEGREP

Click here to download the sequence:
Link to NCBI Protein BLAST