Transcript Information: R_Transcript_359858.p1


Annotated TAIR IDAT3G14172.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4698860-4704773 | Reverse length=1270
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38027001988997
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.34008145760063
Replicate 20
Replicate 30.12605285153046
Condition 3: 24 Hour
Replicate 10.15942921685906
Replicate 20
Replicate 30.75998974607282


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_359858.p1 GENE.R_Transcript_359858~~R_Transcript_359858.p1 ORF type:internal len:144 (+),score=29.54 R_Transcript_359858:3-431(+)
GACGAGAAAGAGGAAATCATGGGACATGGTTCTCTTGTTCAACTTCTGGAGCACTTACCCAACGTAAAGGATCAACTTGCTGAAGGATCTCGTAGCTGTAGATCAGAGTCACCAGGCAATGTAAATCGAGAGGCATGGTTCACAAAAGCCACATTACAAAGGTTTCTTCATATAGTTGGTTCACCTGATTCACTAAAGAAATCTGTTGCTATAAGCAATGAGATGTTCCAGTTGGAGGAAACAAGAAAGTTTCACCTTTCTTTATATCAAAAGGTAATAACACACCTTTCATCCTTGTGGCTTGTTGGCTGCCCATTGGTTTCGGTACTAACTTGCACTGCAATGTTTCAATTCGTGAATGATGTGGCAAAACAACAGGCTGGAGATGGGATTATGTCATCTGATAATTCAAAGAATGAGTTGCTGCGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_359858.p1 GENE.R_Transcript_359858~~R_Transcript_359858.p1 ORF type:internal len:144 (+),score=29.54 R_Transcript_359858:3-431(+)
DEKEEIMGHGSLVQLLEHLPNVKDQLAEGSRSCRSESPGNVNREAWFTKATLQRFLHIVGSPDSLKKSVAISNEMFQLEETRKFHLSLYQKVITHLSSLWLVGCPLVSVLTCTAMFQFVNDVAKQQAGDGIMSSDNSKNELLR

Click here to download the sequence:
Link to NCBI Protein BLAST