Transcript Information: R_Transcript_36009.p1


Annotated TAIR IDAT3G26420.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
Annotated Gene Symbol(s)ATRZ-1A
Annotation TypeOrtholog
Chromosome Positionchr3:9671953-9673055 | Forward length=245
E-Value2.2E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1168.56382091635
Replicate 2138.00771127723
Replicate 3156.02667529906
Condition 2: 8 Hour
Replicate 1125.21775063769
Replicate 2104.88128920528
Replicate 3131.97060675249
Condition 3: 24 Hour
Replicate 1189.46318491475
Replicate 2178.32579430389
Replicate 3194.73046874464


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36009.p1 GENE.R_Transcript_36009~~R_Transcript_36009.p1 ORF type:5prime_partial len:281 (+),score=64.28,RRM_1|PF00076.18|8.2e-21,RRM_6|PF14259.2|2.4e-11,RRM_5|PF13893.2|5.1e+03,RRM_5|PF13893.2|2.6e-07,zf-CCHC|PF00098.19|7.6e+03,zf-CCHC|PF00098.19|1.5e-07,zf-CCHC|PF00098.19|8e+03 R_Transcript_36009:2-844(+)
CCAATTGGAGATTGCCCAAATTATACTAATAGTCGCAGCGCAGCGTTTGAAGGGTTTGGAGTTCGAGACAGTAGACGTATATATAAGGTAGTCCAAGTCTCATCCAGTGGATTAGTTAGATACTTTGTAGGCGTAAGTGTGCTGTTTGTTGGGTTCACATTCTCTAGGGTTACTTCCTTCAAGTCAGCTCTCGAGGTAAAAATGAGTGATGCGGATGAGTATCGTTGCTTCGTTGGAAGCCTGTCATGGTCTACTACTGACAGAGGCCTGAAAGAGGCATTCGAGAAATTTGGTCGTCTTCTTGAGGCAAAGGTTGTTTTAGACAAGTTCTCTGGACGATCTCGTGGATTTGGTTTTGTTTCTTTTGATGATAGGAGAGCTATGGAAGAAGCTATTGAGGCAATGAATGGCATGGATTTGGATGGACGTCCTATCACTGTGGAAAGAGCTCAGCCTAGCCAAGGCGGCTCTAGGGACCGAGACGGATATTATGATCGTGACCGTGGCCGTGATCGTGATCGTGACCGTCCTCGTGGTTATGGTGGAGGGTCACGAGGAGGAGGTGGAGGTGGCGGTGAGTGTTTCAAATGTGGCAGGCCTGGTCATTTTGCTCGTGAATGCCCTGATGATGGAGGTAGGGGTGGTGGTAGGTATGGTGGCAGAGGAGACCGTAAGGGTGGTGGTGGTCACTATGGACCTGATCGTGGTGGGGATCGCTATGGTGGCGGTGGCGGTGGTGGACGTTACAGAGATTCTGGTAGTCATGGAGGATCTGGAAGTGATAGGTATGGCCGTGATCGTTCTGGTCCATATGAGCGACCTGGGGCTGGTGGTTACCGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36009.p1 GENE.R_Transcript_36009~~R_Transcript_36009.p1 ORF type:5prime_partial len:281 (+),score=64.28,RRM_1|PF00076.18|8.2e-21,RRM_6|PF14259.2|2.4e-11,RRM_5|PF13893.2|5.1e+03,RRM_5|PF13893.2|2.6e-07,zf-CCHC|PF00098.19|7.6e+03,zf-CCHC|PF00098.19|1.5e-07,zf-CCHC|PF00098.19|8e+03 R_Transcript_36009:2-844(+)
PIGDCPNYTNSRSAAFEGFGVRDSRRIYKVVQVSSSGLVRYFVGVSVLFVGFTFSRVTSFKSALEVKMSDADEYRCFVGSLSWSTTDRGLKEAFEKFGRLLEAKVVLDKFSGRSRGFGFVSFDDRRAMEEAIEAMNGMDLDGRPITVERAQPSQGGSRDRDGYYDRDRGRDRDRDRPRGYGGGSRGGGGGGGECFKCGRPGHFARECPDDGGRGGGRYGGRGDRKGGGGHYGPDRGGDRYGGGGGGGRYRDSGSHGGSGSDRYGRDRSGPYERPGAGGYR*

Click here to download the sequence:
Link to NCBI Protein BLAST