Transcript Information: R_Transcript_36057.p2


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeOrtholog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value7.6E-297
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.289794368289
Replicate 25.5990134443462
Replicate 37.1265405854696
Condition 2: 8 Hour
Replicate 16.4842197915853
Replicate 25.3417662176166
Replicate 39.1430334976764
Condition 3: 24 Hour
Replicate 110.458556625954
Replicate 25.7588731547618
Replicate 313.862212968368


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36057.p2 GENE.R_Transcript_36057~~R_Transcript_36057.p2 ORF type:complete len:540 (+),score=100.35,HMG-CoA_red|PF00368.14|6.3e-141 R_Transcript_36057:234-1853(+)
ATGACGGAAGTTCGCCGGCGACGAGAAGCAAGGAGTTGCCATGGTGATGATTTAAAGGCATCAGACGCTCTGCCTTTACCCCTCTACTTAACCAACACAGTCTTCTTTACTCTCTTCTTCTCTGTAGCTTATTACCTTCTTCAACGTTGGCGTGACAAGATCCGTCACTCTGTTCCTCTCCACGTCGTCACTTTCCCTGAACTTGCTGCCATCATCACTCTCATCGCCTCCTTCATCTACCTTCTCGGCTTTTTCGGCATCGATTTCGTCCAAACCTTGGCTTCCACTTCCCCTGCTGATTCTTCTCCTCCTCACGTGGTAGATTTGGACCCCACCACTCATCATGAAGACAATGTTATTATGACCGATGATGACCACCTGCTGGTTGCGTCAGTGGTGGATGGGTCCCTCCCATCCTACTCCCTCGAGTCCCGCCTTGGTGACTGCCAAAGGGCAGCCGCCATCAGGCGAGAGGCTGTCCAGCAGATCACTGGACGGTCGCTCGAGGGGCTCCCTCTGGAGGGGTTTGACTACGACTCCATCTTAGGCCAATGCTGTGAGATGCCTATTGGTTATGTCCAGATTCCGGTGGGGGTTGCGGGGCCCTTGCTGCTCGATGGCTTTGAGTTCATCCTTCCTATGGCTACCACTGAGGGCTGCCTTGTTGCTAGTACCAACCGTGGTTGTAAGGCTATCTATGCTTCTGGTGGAGCTACTAGCTATGTTCTTAGGGATGGTATGACCAGAGCTCCTGTGGTTCGCTTCTCTTCTGCTAAGAGGGCTTCTCAGCTCAAGTCTTTCCTCGAGGACCCCCTCAATTTTGACTCCCTCGCCTTCGTCTTTAACAAATCAAGCAGATTTGCGAGGCTGCAAAGTATACAGTGCTCCATGGCTGGAAAGAACTTATACACAAGGTTCAGCTGTAGCACTGGAGATGCTATGGGGATGAACATGGTGTCTAAGGGTGTCCAAAATGTCCTCGATTTCCTTCACGACAATGATTTTCCCGACATGGATGTCATTGGCATCTCTGGAAACTTGTGTTCAGACAAGAAGGCAGCAGCAGTAAATTGGATAGAAGGGCGGGGGAAGTCAGTTGTTTGTGAGGCAGTAATCAAGGAAGAAGTGGTGAATAAAGTGTTGAAAACCAATGTGGGTGCCCTGGTAGAGCTGAATATGCTGAAGAACCTTGCTGGTTCAGCTGTTGCTGGAGCACTTGGTGGTTTTAACGCCCATGCCAGCAACATAGTGTCGGCAATTTTCATAGCCACTGGACAAGATCCTGCACAGAATGTGGAGAGTTCCCACTGCATCACCATGATGGAACCTGTAAATGATGGCAAGGACCTTCATATCTCCGTGTCCATGCCTTCCATTGAGGTAGGTACAGTTGGAGGGGGGACACAGCTTGCATCGCAAGGGGCTTGCCTAAACCTTCTAGGGGTGAAGGGAGCAAGCAAGGAGTCAGCAGGATGGAACTCGAGACTGCTAGCCACCATTGTAGCCGGTTCAGTTCTGGCTGGGGAGCTGTCGCTTATGTCGGCCATTGCAGCAGGGCAGCTGGTAAGGAGCCACATGAAATACAACAGGTCAAGCAGGGATGTATCCAAAGTACTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36057.p2 GENE.R_Transcript_36057~~R_Transcript_36057.p2 ORF type:complete len:540 (+),score=100.35,HMG-CoA_red|PF00368.14|6.3e-141 R_Transcript_36057:234-1853(+)
MTEVRRRREARSCHGDDLKASDALPLPLYLTNTVFFTLFFSVAYYLLQRWRDKIRHSVPLHVVTFPELAAIITLIASFIYLLGFFGIDFVQTLASTSPADSSPPHVVDLDPTTHHEDNVIMTDDDHLLVASVVDGSLPSYSLESRLGDCQRAAAIRREAVQQITGRSLEGLPLEGFDYDSILGQCCEMPIGYVQIPVGVAGPLLLDGFEFILPMATTEGCLVASTNRGCKAIYASGGATSYVLRDGMTRAPVVRFSSAKRASQLKSFLEDPLNFDSLAFVFNKSSRFARLQSIQCSMAGKNLYTRFSCSTGDAMGMNMVSKGVQNVLDFLHDNDFPDMDVIGISGNLCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVNKVLKTNVGALVELNMLKNLAGSAVAGALGGFNAHASNIVSAIFIATGQDPAQNVESSHCITMMEPVNDGKDLHISVSMPSIEVGTVGGGTQLASQGACLNLLGVKGASKESAGWNSRLLATIVAGSVLAGELSLMSAIAAGQLVRSHMKYNRSSRDVSKVL*

Click here to download the sequence:
Link to NCBI Protein BLAST