Transcript Information: R_Transcript_36058.p1


Annotated TAIR IDAT4G21300.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11336479-11339052 | Forward length=857
E-Value3E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0896210859882
Replicate 24.8154277156985
Replicate 35.6490105045999
Condition 2: 8 Hour
Replicate 15.6761314550951
Replicate 25.3489655699014
Replicate 37.9902897552135
Condition 3: 24 Hour
Replicate 16.5674615004036
Replicate 25.3030523842942
Replicate 37.3948595366336


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36058.p1 GENE.R_Transcript_36058~~R_Transcript_36058.p1 ORF type:complete len:811 (+),score=128.38,PPR|PF01535.16|4.6e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|0.0072,PPR|PF01535.16|2.8,PPR|PF01535.16|6e-06,PPR|PF01535.16|0.022,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|0.16,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|0.00021,PPR|PF01535.16|0.23,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|6,PPR_2|PF13041.2|1.8e+03,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|0.039,PPR_2|PF13041.2|46,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|3.1e+03,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|2.1e-13,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|27,PPR_1|PF12854.3|28,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|10,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|72,PPR_1|PF12854.3|5.8e+03,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.29,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.083,PPR_3|PF13812.2|33,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.6e+02,DYW_deaminase|PF14432.2|1.2e+03,DYW_deaminase|PF14432.2|3e-05 R_Transcript_36058:364-2796(+)
ATGGAGATAATACCTCTTTCTAATGTGTCCACCTCTGGGTTTCCCCATCAATGCAGCAACCTTCAATGTCGCGTCTTCCTTAAACAATTTAGGGTATCATCTCTCTTCTGGAACCCTAGGCATGCTTCAAATTCATGGAGCTTTAAGTGTCAAAAGCGTACTGCTGTAGTACAAACTCAACATCATTCCTCTTATAAGTTAGTTGAGGCCAGTGATTTTGCACAGAACAAAGAATTGAGTATTGAGTCCGTGATTGAGAAGCAGATTAAGGAGTTTACGTCCAAGAGTCTTCATGGAGATGCTGTCTCACTGTATCTTAATATGTTAGATAATGGTTTTGTCATAGAAGAGTTTCATTCATTCCCTGTTTTAGTTAAAGCTGTTGGTGGTCTTAATGATTTTGAATTAAACAGGCAGTTTCATGGGTATTTGATGAAATTAGGAGTCATAAAAAATAACTATGTAGCAAATTCTCTTTTGAGTGCTCTATGGAAATGTGGCGCAAGTGATTATGCACTTAGGCTGTTTGAGACCATGCCGGTGAGGGATTCGGTTTCGTGGAGTACTATGATATGGGGGTTTCATCAATCGGGTTTGTATACTAGGTCATTAGAATGGTTTAGATGCATGATTACTGAATCTGGAATATATCCAAATAAGGTGGCTTGCCTTTCTGCTCTTGCATCATGTGGTTCGATGCAGGCTCTAATACATGGACGGGAAGTACATGCTTTTGTGATTAAAAGTGGGTTGGATGTTGATGAATTTTTGTTGAATGGATTGCTTGAGATGTATATGAAATGTGGGTGTGTGAGAGTTGCCGAACAACTTTTTGAGAGCATTGTTGATGATGTAAGAGAAAATACTGTGTTCTGGAATGTCATGATTTTGGGTTATGTGGAGAATGGTTATGTCTTGGAGGCATTAGATTGTTTCATTGAGATGATGATGTCTGGTGTTGTACCGGATTCTTCAGCTATGGTTGCAGTTCTAATCTTGTGTTCACAGTCCTCAAATTTAGCTTTCGGGAAGCAAATCCATGCCCTTAGCATCAAAATTGGTGTAGAGGTGGATGTTAGAGTTAGAACATCACTAATAGACATGTACTTCAATGCTGTCAGTCAGGACTGTGGGTTGAAATTGTTTGATGGGTCTCATAGTCGTAATTTAGTCATGTGGGGCACTGTAATCTCGAATTGTGCTCGAAGTGGTTATTCCAGGAAAGCACTTGATTTATTTATTGCTGGATTTGAACATGGCTTTTTGGACTCTATGACATTGTTGGCTGCACTACGAGCTTGTTCCTCCCTAACCCTTAAGTATGAAGGTATGGTGATCCATGGAATGGCTGTTAAGTTGGGGTTGGACCTTGATAATTACATTGGCAGTGCACTAATCGATATGTATGCAAAATGCCAAGATATGATGTCTGCCCAAAGTGCTTTTCTACATTTACCTGTGAAGGACGATGTATCATGGAGTAGTCTCATATCTGGATATGCTAATAATGAATGCTGGGATGATGCTGTGGAAGCTTTTTATGAAATGCAGCATCATCGAATAAAGCCTAATGCTGTGCTAATTGCATGTGTCCTATCGATTTGTGCTCGTGTGTTTACAAATTTACATTGTAAAGAAATTCATGGCTATATTATACGCCAAGTATTTGAGACAAATACTCTTGTGAACAACTCCCTCATAGCAACCTATGCAAAATGTGGGAACTTGAAAAGCTCACAGAGAATCTTCGTGCAGATGGAGGACAAAGATGAAGTAACATGGAATTCAATTATGCTTGGTGTAGGGCAGCATGGCCACGTTGAAGAAATGTTTGGTTTATTTCAGAGAATGAAAGAGGCTGGCTTGAAGCCTGACCACCAGACATTTACTGCTATGCTGTCTGCATGTAGTCATACAGGAAGAGTCACAGAGGGATTGGAGTATTTTCGAAGCATGATAGAAGAGCACAAACTCGAACCTAAACTTGAGCAATACACTTGTTTGGTCGATATTTTGGGTCGAGCTGGCTATTTAGAGCAAGCATATGAACTGATATTATCTATGCCTTACACCCCAGATGATAGGATTTGGGGATCGTTGCTTGGATCTTGTAGAAATTATGGCAATGGAAGGCTGGCAGAGCTTGTAGCCAATCACATTTTCGACTTAAATCCTGCAAGTATAGGTTATCGTGTACTTCTTGCCAACTTGTATGAGGATTCAGGTAATTGGAAGAAAGTCACAAAACTGAGATCCAAAATGAAGGAGATGGGACTTGAGAAAAGTCCTGGTTGTAGCTGGATTCATGTTGATAACCAGATACATGTATTTACTGCAAGTGATCGGTCGCATCAACAAGCAGAATGTATATATGCTACTCTTAGAAGTTTGACCATAGAAATGAATAAGTTTGGATATGTTCCTCAGTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36058.p1 GENE.R_Transcript_36058~~R_Transcript_36058.p1 ORF type:complete len:811 (+),score=128.38,PPR|PF01535.16|4.6e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|0.0072,PPR|PF01535.16|2.8,PPR|PF01535.16|6e-06,PPR|PF01535.16|0.022,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|0.16,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|0.00021,PPR|PF01535.16|0.23,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|6,PPR_2|PF13041.2|1.8e+03,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|0.039,PPR_2|PF13041.2|46,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|3.1e+03,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|2.1e-13,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|27,PPR_1|PF12854.3|28,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|10,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|72,PPR_1|PF12854.3|5.8e+03,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.29,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.083,PPR_3|PF13812.2|33,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.6e+02,DYW_deaminase|PF14432.2|1.2e+03,DYW_deaminase|PF14432.2|3e-05 R_Transcript_36058:364-2796(+)
MEIIPLSNVSTSGFPHQCSNLQCRVFLKQFRVSSLFWNPRHASNSWSFKCQKRTAVVQTQHHSSYKLVEASDFAQNKELSIESVIEKQIKEFTSKSLHGDAVSLYLNMLDNGFVIEEFHSFPVLVKAVGGLNDFELNRQFHGYLMKLGVIKNNYVANSLLSALWKCGASDYALRLFETMPVRDSVSWSTMIWGFHQSGLYTRSLEWFRCMITESGIYPNKVACLSALASCGSMQALIHGREVHAFVIKSGLDVDEFLLNGLLEMYMKCGCVRVAEQLFESIVDDVRENTVFWNVMILGYVENGYVLEALDCFIEMMMSGVVPDSSAMVAVLILCSQSSNLAFGKQIHALSIKIGVEVDVRVRTSLIDMYFNAVSQDCGLKLFDGSHSRNLVMWGTVISNCARSGYSRKALDLFIAGFEHGFLDSMTLLAALRACSSLTLKYEGMVIHGMAVKLGLDLDNYIGSALIDMYAKCQDMMSAQSAFLHLPVKDDVSWSSLISGYANNECWDDAVEAFYEMQHHRIKPNAVLIACVLSICARVFTNLHCKEIHGYIIRQVFETNTLVNNSLIATYAKCGNLKSSQRIFVQMEDKDEVTWNSIMLGVGQHGHVEEMFGLFQRMKEAGLKPDHQTFTAMLSACSHTGRVTEGLEYFRSMIEEHKLEPKLEQYTCLVDILGRAGYLEQAYELILSMPYTPDDRIWGSLLGSCRNYGNGRLAELVANHIFDLNPASIGYRVLLANLYEDSGNWKKVTKLRSKMKEMGLEKSPGCSWIHVDNQIHVFTASDRSHQQAECIYATLRSLTIEMNKFGYVPQL*

Click here to download the sequence:
Link to NCBI Protein BLAST