Transcript Information: R_Transcript_3606.p1


Annotated TAIR IDAT3G60600.1
Annotated Gene Namevesicle associated protein
Annotated Gene Symbol(s)VAP27-1, VAP, (AT)VAP, VAP27
Annotation TypeOrtholog
Chromosome Positionchr3:22400537-22402408 | Forward length=256
E-Value7.8E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.532707500894
Replicate 22.4110584210103
Replicate 31.3152193835111
Condition 2: 8 Hour
Replicate 12.3431449710282
Replicate 21.8188277095701
Replicate 30.69479849264639
Condition 3: 24 Hour
Replicate 12.1969193519334
Replicate 21.8994959810067
Replicate 33.979582670345


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3606.p1 GENE.R_Transcript_3606~~R_Transcript_3606.p1 ORF type:complete len:209 (+),score=52.15,Motile_Sperm|PF00635.22|2.1e-26,Motile_Sperm|PF00635.22|6e+03 R_Transcript_3606:167-793(+)
ATGCAACTGAAAAATCAGACTGACAACCATGTCGCTTTCAAGGTAAAGACAACAAATCCAAAGAAATACTGTGTGCGACCTAATACTGGGATTGTGCTGCCAAACTCTACCTGTGATGTCAAAGTGACAATGCAAGCACAAAAAGAAGCTCCAGCAGACATGCAATGCAGGGACAAGTTTCTTCTTCAGAGTGCAGTCACCAGCCCTGGAGCTTCTGTCATGGATGTTACTCCTGATTTGTTTAACAAGGAGTATGGGAATCTCATTGAAGAATGCAAGTTAAAGGTTACTTATGTTTCACCACCTCACCCTCCATCACCTGTTCAAGAAGGATCAGATGAAGGTTCTTCACCCAAGGCTTCCCTATCAGAAAATGGGGTCTTCAGTACTTCTTCTGCTGCTTCAAGAGCATATATCGAACCACAAGATGATACAAAGGCAAGCATGTTTATCTCAAAGCTTACAGAAGAGAGAAACTCTGCCATTCAACTAAACAGCCAGCTTCGGCAGGAAATGGAGCTCTTGAGGCGGGAAAGGAGCAAAAGGCAAGGTGGCATCCCGTTCATGTATGTCATCATTGTCGGCTTGATTGGTATCCTTATTGGATATCTTGTTAAGAGAGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3606.p1 GENE.R_Transcript_3606~~R_Transcript_3606.p1 ORF type:complete len:209 (+),score=52.15,Motile_Sperm|PF00635.22|2.1e-26,Motile_Sperm|PF00635.22|6e+03 R_Transcript_3606:167-793(+)
MQLKNQTDNHVAFKVKTTNPKKYCVRPNTGIVLPNSTCDVKVTMQAQKEAPADMQCRDKFLLQSAVTSPGASVMDVTPDLFNKEYGNLIEECKLKVTYVSPPHPPSPVQEGSDEGSSPKASLSENGVFSTSSAASRAYIEPQDDTKASMFISKLTEERNSAIQLNSQLRQEMELLRRERSKRQGGIPFMYVIIVGLIGILIGYLVKRV*

Click here to download the sequence:
Link to NCBI Protein BLAST