Transcript Information: R_Transcript_360888.p1


Annotated TAIR IDAT4G05320.2
Annotated Gene Namepolyubiquitin 10
Annotated Gene Symbol(s)UBQ10
Annotation TypeOrtholog
Chromosome Positionchr4:2718559-2719932 | Forward length=457
E-Value6.3E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3834655662756
Replicate 20.7939777468348
Replicate 30.8662211696024
Condition 2: 8 Hour
Replicate 11.3374632114042
Replicate 20.56371971028199
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.092669155002426
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_360888.p1 GENE.R_Transcript_360888~~R_Transcript_360888.p1 ORF type:5prime_partial len:238 (+),score=13.71,ubiquitin|PF00240.19|3.6e-33,ubiquitin|PF00240.19|3.6e-33,ubiquitin|PF00240.19|3.6e-33,Rad60-SLD|PF11976.4|5.9e-16,Rad60-SLD|PF11976.4|5.9e-16,Rad60-SLD|PF11976.4|5.9e-16,Ubiquitin_2|PF14560.2|4.5e-05,Ubiquitin_2|PF14560.2|5.6e-05,Ubiquitin_2|PF14560.2|5.6e-05,Rad60-SLD_2|PF13881.2|0.043,Rad60-SLD_2|PF13881.2|0.053,Rad60-SLD_2|PF13881.2|0.055,Telomere_Sde2|PF13019.2|1.6,Telomere_Sde2|PF13019.2|1.6,Telomere_Sde2|PF13019.2|1.2,DUF2407|PF10302.5|0.91,DUF2407|PF10302.5|1.2,DUF2407|PF10302.5|3,DUF2870|PF11069.4|3.1,DUF2870|PF11069.4|3.1,DUF2870|PF11069.4|3.5 R_Transcript_360888:2-715(+)
AACAACACAAAAAAAAAAAACAACATGCAAATCTTCGTAAAAACGCTCACAGGCAAAACAATTACTCTCGAAGTCGAACCTTCGGATACAATTGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAACAACGCTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGTACCTTATCCGACTACAATATCCAAAAGGAATCAACCCTCCATTTGGTCCTTCGTCTCCGTGGTGGTATGCAAATCTTCGTCAAGACCTTAACAGGAAAAACAATCACTCTCGAAGTTGAACCATCGGACACAATCGAAAACGTTAAGGCCAAGATCCAAGATAAGGAAGGTATTCCACCAGATCAACAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACCTTATCCGACTACAACATTCAAAAGGAATCAACCCTTCATTTGGTTCTTCGTTTACGTGGTGGTATGCAAATCTTCGTTAAAACTCTTACTGGCAAAACAATTACTCTTGAAGTCGAACCAAGCGATACAATCGAAAACGTCAAAGCCAAAATTCAAGACAAGGAAGGTATCCCACCCGATCAACAACGACTCATTTTTGCAGGCAAACAATTAGAAGATGGTCGCACTCTCTCGGACTACAACATCCAAAAAGAGTCAACACTCCATTTAGTTCTTCGTCTTCGTGGTGGTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_360888.p1 GENE.R_Transcript_360888~~R_Transcript_360888.p1 ORF type:5prime_partial len:238 (+),score=13.71,ubiquitin|PF00240.19|3.6e-33,ubiquitin|PF00240.19|3.6e-33,ubiquitin|PF00240.19|3.6e-33,Rad60-SLD|PF11976.4|5.9e-16,Rad60-SLD|PF11976.4|5.9e-16,Rad60-SLD|PF11976.4|5.9e-16,Ubiquitin_2|PF14560.2|4.5e-05,Ubiquitin_2|PF14560.2|5.6e-05,Ubiquitin_2|PF14560.2|5.6e-05,Rad60-SLD_2|PF13881.2|0.043,Rad60-SLD_2|PF13881.2|0.053,Rad60-SLD_2|PF13881.2|0.055,Telomere_Sde2|PF13019.2|1.6,Telomere_Sde2|PF13019.2|1.6,Telomere_Sde2|PF13019.2|1.2,DUF2407|PF10302.5|0.91,DUF2407|PF10302.5|1.2,DUF2407|PF10302.5|3,DUF2870|PF11069.4|3.1,DUF2870|PF11069.4|3.1,DUF2870|PF11069.4|3.5 R_Transcript_360888:2-715(+)
NNTKKKNNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST