Transcript Information: R_Transcript_361220.p1


Annotated TAIR IDAT5G28823.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT2G07760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10837849-10839826 | Reverse length=568
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59359222616971
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.37329767849925
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_361220.p1 GENE.R_Transcript_361220~~R_Transcript_361220.p1 ORF type:5prime_partial len:123 (+),score=20.98,DUF4283|PF14111.2|4e-19 R_Transcript_361220:1-369(+)
CCTTGGTATGTGGGGAATAATATGTTAATTCTAAAACACTGGAGTCCTAATTTTAGAAATGAGATGGATGGCATGTGTAACATTCCTGTGTGGGTAATTTTACCAAACTTGGATCCTTGCTTTTGGTCTGCTGCTGCCTTAAGCATGGTTGTTAGTAAGTTGGGTAAGCCACTGTTTGCTGATCAATATACTACTTCCAAAACTAAAATCTCTTTTGCTAGGATTTTGTTGGAGATGGATGTATCGGAAGACATACCCATGTCATTAACTGTGAAAACCCCATTTGGTGTTGTTACTGAGCAAGAGGTGAATTATGAATGGGTGCCTTATTTTTGCAAGAGGTGGTGGATGTGGATGATGAGAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_361220.p1 GENE.R_Transcript_361220~~R_Transcript_361220.p1 ORF type:5prime_partial len:123 (+),score=20.98,DUF4283|PF14111.2|4e-19 R_Transcript_361220:1-369(+)
PWYVGNNMLILKHWSPNFRNEMDGMCNIPVWVILPNLDPCFWSAAALSMVVSKLGKPLFADQYTTSKTKISFARILLEMDVSEDIPMSLTVKTPFGVVTEQEVNYEWVPYFCKRWWMWMMRR*

Click here to download the sequence:
Link to NCBI Protein BLAST