Transcript Information: R_Transcript_36160.p1


Annotated TAIR IDAT5G14230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 Ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4591883-4595775 | Forward length=751
E-Value1.7E-301
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.687215836796
Replicate 217.769978143445
Replicate 319.249359324498
Condition 2: 8 Hour
Replicate 122.134281278842
Replicate 220.66972271034
Replicate 321.289464076973
Condition 3: 24 Hour
Replicate 128.304523436797
Replicate 220.996182833407
Replicate 325.986722611454


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36160.p1 GENE.R_Transcript_36160~~R_Transcript_36160.p1 ORF type:5prime_partial len:833 (+),score=127.05,Ank_2|PF12796.3|3.7e-07,Ank_2|PF12796.3|0.0019,Ank_2|PF12796.3|1.3e-07,Ank_2|PF12796.3|8.9e-06,Ank_2|PF12796.3|8.6e-12,Ank_2|PF12796.3|2.6e-08,Ank_5|PF13857.2|93,Ank_5|PF13857.2|83,Ank_5|PF13857.2|4.7,Ank_5|PF13857.2|1.1e+02,Ank_5|PF13857.2|14,Ank_5|PF13857.2|0.0033,Ank_5|PF13857.2|1e-06,Ank_5|PF13857.2|0.26,Ank_5|PF13857.2|7.5e-07,Ank_4|PF13637.2|0.00033,Ank_4|PF13637.2|7.8e+02,Ank_4|PF13637.2|70,Ank_4|PF13637.2|0.00017,Ank_4|PF13637.2|0.011,Ank_4|PF13637.2|0.00021,Ank_4|PF13637.2|2e-06,Ank_4|PF13637.2|1.5,Ank_3|PF13606.2|0.069,Ank_3|PF13606.2|3.2e+02,Ank_3|PF13606.2|0.039,Ank_3|PF13606.2|5.2e+03,Ank_3|PF13606.2|9.9e+03,Ank_3|PF13606.2|0.2,Ank_3|PF13606.2|1.4e+04,Ank_3|PF13606.2|7.1e+02,Ank_3|PF13606.2|0.36,Ank_3|PF13606.2|4.5,Ank_3|PF13606.2|0.013,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|7.9e+02,Ank|PF00023.26|1.1,Ank|PF00023.26|8.8e+02,Ank|PF00023.26|35,Ank|PF00023.26|3.4e+03,Ank|PF00023.26|6e+03,Ank|PF00023.26|6.8e+03,Ank|PF00023.26|2.5e+02,Ank|PF00023.26|3.2e+02,Ank|PF00023.26|0.11,Ank|PF00023.26|9.8,Ank|PF00023.26|0.00055 R_Transcript_36160:1-2499(+)
ACTACAAATCCGCATTTTTCGAGAATACACTCAGACAACAAACTCCTAGAGAGAGAATATAGCAGAAAGAAAAAAAAAAAAAAGGAGGAAGAAAATGGAGGTAATGTGAAGGAGCTACCTGTCGAGGATAAAATCGTCATTTCAAACTTCTCGGCACGTTTTCCAATGCACGGAGGAGTGAGAGTGTACAACAACACTACCGGCAGGTTTCTTGCCGGAAAACAGATATTTCCGATGAGCTCCGGCGACGTTGAAGCTGCTTCTCAGAAACTCATCGACGCTTGTCTTGCTGGAGACACGAAGCTTTCTCTCGATCTCCTCGCTGATCCGCTCGTTGATATTGATTTCGTAGGTACGGTGAATTTGAGGTCCAGGAAAACGGAACTCGTTCCGTCTGGTGAGTCGACTCACCGAGTTGAAGTTGAGTACGAGGAGTTTAAGACCGAGGTTACGGCGCTGTTCCTCGCTTCTCACTCCGGGAATCTTCTCCTCGTTAGGAAATTGCTGAGTTTCGGGGCTGATGTGAACAAGAAACTGTTCCGTGGCTATGCAACTACAGCAGCAGTTAGGGAAGGTCATGTTGAAATTCTTGAAGCTCTTCTGAAAGCTGGGGCGTGTCAGCCAGCATGTGAAGAGGCATTAGTGGAGGCGAGTTATGTAGGGCGGGCAAGGCAAGCTGAATTACTTATGGGGTCCAACTTGATTAGCCAGCAGGTAGCAGTTCATGCCCTTGTCACTGCTTGCTCAAGGGGGTTTCTTGATGTTATTGATGTGTTGATTAAGTGTGGAGTGGATGCTAATGCAATGGATCGTATGCTGCTTCTATCATCCAAGCCTTATCTTCACATGAATGTTGACTGCAATGCAATTGTTGCCGCAATTGTCAATAGGCAGACTTCTGTGGTTGAATTACTTTTAAGGGTAGGTGTCCGAACAGACATGAAAGTGAGTTTAGGAGCCTGGTCATGGGACCCAGCCACTGGGGAAGAGTACAAAGTAGGTGCTGGACTAGCTGAACCTTATGACATCGCTTGGTGTGCAGTGGAGTATTTTGAAGAAAGTGGTAGTATCTTGCGACTGCTCCTTCAACACCTCTCTCCAAACACGCGTCATATGGGAAGGACCCTAATCTACCATGCTATCATATGTAACAATGCAGAAGCACTCAACGTGATATTGAGTTGTGGTGCAGATGCAGAATTTCCTCTAAAAACAGGCCAGGAAATTGAGATTCGTCCTATACATCTGGTTGCTCGGCTTGGGGCAGTGGATTCGCTTTGGCGTCTGATAAATGCTGGGTGCAATGTCAACTCCAGGAACCGTTCAGGAGAGACTGCTGTTATGATATGCACTAAATACAAGCATCAGGAATGTCTTAAAGCACTAGCCTCAGTAGGTGCCGACTTTGGTCTCGTAAATGCAGCAGGTGAGTCTACAACATCGATAGCAGGATCCACAAAGTGGGCATTAGGTTTCCAGCAACTAATCCTTGATGTCATTCGAGCCGGGCAAATCGTCAAGTCGAGCAACTCTACAGTATTCTCTTCTGCCATTTTTGTGGTCAAAGGAAACGATATTCAAGCATTGAAAATTCTTACAAAGCAACCAGGTGTTGCGCTTGATGACCAAGATGAAGATGGGTTCACAGCAGCCATGATTGCTGCATCAAGTGGTCAAGTAGAGGCCTTCCGTTTGCTTGTCTGCTCTGGAGCTGATGTATCGCTACGCAACAAGTATGGAGAAACAGCTTTTAGTTTGTCAGAGGAAAAGAACAGGGATCGAGAGGTTCTCGAAAAGATACTGTTGGATTATGCTCTTGAAAAAGGGAAACGTGTTCCCACCACCTCCTATGCCCTACATTGTGCAGCACGGCGTGGGGACTTGGTTTTAGTTCGCCGCCTAACAAGTATGGGTTATGACGTTAATGTCACCGACGTTGATGGCTACACCCCACTCATGTTAGCCGCAAAGGAAGGCTACGGAAACCTGTGTCACTTCCTAATCTCACGTGGTGCAAGATGTGACATCAAAAATGAGAGACGTGAGACAGCACTGTCACTAGCAAGGCAGAATGGTGTCAGCAGTGATGCAGAGCGAGTAATACTGGATGAACTTGCACGGCAACTAGTACTGTGTGGTGATAGGGTGAAGAAACACACAAAAGGAGGCAAGGGGTCGCCTCATTCAAAGAAACTGAGGATGTTGGCAACGACTGGGGTCTTACGTTGGGGTAGATCAGGGAGGAGAAATGTGATCTGCACGGAGGCTGAAGTGGGTCCAAGCTGGCTGTTCCTTCAAGACAGACCAAGAAAGCGCGGTGGATATGAGCCAGGCCTGTTTCATGTGGTCACTATCAACAACAAGGAGGTCCACTTTGTCTGCAAAGGTGGTGCAGAGGTGGCTAAGTTGTGGGTCAGAGGCATAAAACTAGTGACTAGGGAAGCCATTTTTGGTAAGAAAACACTCCAGTCCATGTTTAGCCAGGAATTCGATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36160.p1 GENE.R_Transcript_36160~~R_Transcript_36160.p1 ORF type:5prime_partial len:833 (+),score=127.05,Ank_2|PF12796.3|3.7e-07,Ank_2|PF12796.3|0.0019,Ank_2|PF12796.3|1.3e-07,Ank_2|PF12796.3|8.9e-06,Ank_2|PF12796.3|8.6e-12,Ank_2|PF12796.3|2.6e-08,Ank_5|PF13857.2|93,Ank_5|PF13857.2|83,Ank_5|PF13857.2|4.7,Ank_5|PF13857.2|1.1e+02,Ank_5|PF13857.2|14,Ank_5|PF13857.2|0.0033,Ank_5|PF13857.2|1e-06,Ank_5|PF13857.2|0.26,Ank_5|PF13857.2|7.5e-07,Ank_4|PF13637.2|0.00033,Ank_4|PF13637.2|7.8e+02,Ank_4|PF13637.2|70,Ank_4|PF13637.2|0.00017,Ank_4|PF13637.2|0.011,Ank_4|PF13637.2|0.00021,Ank_4|PF13637.2|2e-06,Ank_4|PF13637.2|1.5,Ank_3|PF13606.2|0.069,Ank_3|PF13606.2|3.2e+02,Ank_3|PF13606.2|0.039,Ank_3|PF13606.2|5.2e+03,Ank_3|PF13606.2|9.9e+03,Ank_3|PF13606.2|0.2,Ank_3|PF13606.2|1.4e+04,Ank_3|PF13606.2|7.1e+02,Ank_3|PF13606.2|0.36,Ank_3|PF13606.2|4.5,Ank_3|PF13606.2|0.013,Ank_3|PF13606.2|1.6e+04,Ank_3|PF13606.2|7.9e+02,Ank|PF00023.26|1.1,Ank|PF00023.26|8.8e+02,Ank|PF00023.26|35,Ank|PF00023.26|3.4e+03,Ank|PF00023.26|6e+03,Ank|PF00023.26|6.8e+03,Ank|PF00023.26|2.5e+02,Ank|PF00023.26|3.2e+02,Ank|PF00023.26|0.11,Ank|PF00023.26|9.8,Ank|PF00023.26|0.00055 R_Transcript_36160:1-2499(+)
TTNPHFSRIHSDNKLLEREYSRKKKKKKEEENGGNVKELPVEDKIVISNFSARFPMHGGVRVYNNTTGRFLAGKQIFPMSSGDVEAASQKLIDACLAGDTKLSLDLLADPLVDIDFVGTVNLRSRKTELVPSGESTHRVEVEYEEFKTEVTALFLASHSGNLLLVRKLLSFGADVNKKLFRGYATTAAVREGHVEILEALLKAGACQPACEEALVEASYVGRARQAELLMGSNLISQQVAVHALVTACSRGFLDVIDVLIKCGVDANAMDRMLLLSSKPYLHMNVDCNAIVAAIVNRQTSVVELLLRVGVRTDMKVSLGAWSWDPATGEEYKVGAGLAEPYDIAWCAVEYFEESGSILRLLLQHLSPNTRHMGRTLIYHAIICNNAEALNVILSCGADAEFPLKTGQEIEIRPIHLVARLGAVDSLWRLINAGCNVNSRNRSGETAVMICTKYKHQECLKALASVGADFGLVNAAGESTTSIAGSTKWALGFQQLILDVIRAGQIVKSSNSTVFSSAIFVVKGNDIQALKILTKQPGVALDDQDEDGFTAAMIAASSGQVEAFRLLVCSGADVSLRNKYGETAFSLSEEKNRDREVLEKILLDYALEKGKRVPTTSYALHCAARRGDLVLVRRLTSMGYDVNVTDVDGYTPLMLAAKEGYGNLCHFLISRGARCDIKNERRETALSLARQNGVSSDAERVILDELARQLVLCGDRVKKHTKGGKGSPHSKKLRMLATTGVLRWGRSGRRNVICTEAEVGPSWLFLQDRPRKRGGYEPGLFHVVTINNKEVHFVCKGGAEVAKLWVRGIKLVTREAIFGKKTLQSMFSQEFDD*

Click here to download the sequence:
Link to NCBI Protein BLAST