Transcript Information: R_Transcript_36161.p1


Annotated TAIR IDAT5G14230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 Ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4591883-4595775 | Forward length=751
E-Value4.4E-273
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0298059488689
Replicate 23.4557501932062
Replicate 34.4842366615909
Condition 2: 8 Hour
Replicate 14.0606234887576
Replicate 24.321616814693
Replicate 34.0060287778161
Condition 3: 24 Hour
Replicate 15.0094965895863
Replicate 24.0425474525123
Replicate 35.0489094352569


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36161.p1 GENE.R_Transcript_36161~~R_Transcript_36161.p1 ORF type:5prime_partial len:802 (+),score=116.14,Ank_2|PF12796.3|0.0017,Ank_2|PF12796.3|3.6e-07,Ank_2|PF12796.3|0.0018,Ank_2|PF12796.3|0.00013,Ank_2|PF12796.3|8.4e-06,Ank_2|PF12796.3|6.1e-08,Ank_2|PF12796.3|1.6e-08,Ank_5|PF13857.2|89,Ank_5|PF13857.2|80,Ank_5|PF13857.2|4.5,Ank_5|PF13857.2|1e+02,Ank_5|PF13857.2|13,Ank_5|PF13857.2|0.0032,Ank_5|PF13857.2|9.9e-07,Ank_5|PF13857.2|0.25,Ank_5|PF13857.2|7.2e-07,Ank_4|PF13637.2|0.00032,Ank_4|PF13637.2|7.4e+02,Ank_4|PF13637.2|67,Ank_4|PF13637.2|0.00016,Ank_4|PF13637.2|0.01,Ank_4|PF13637.2|0.0002,Ank_4|PF13637.2|1.9e-06,Ank_4|PF13637.2|1.5,Ank_3|PF13606.2|0.066,Ank_3|PF13606.2|3.1e+02,Ank_3|PF13606.2|0.037,Ank_3|PF13606.2|4.9e+03,Ank_3|PF13606.2|9.5e+03,Ank_3|PF13606.2|0.19,Ank_3|PF13606.2|1e+04,Ank_3|PF13606.2|6.8e+02,Ank_3|PF13606.2|0.34,Ank_3|PF13606.2|4.3,Ank_3|PF13606.2|0.013,Ank_3|PF13606.2|1.6e+04,Ank|PF00023.26|1,Ank|PF00023.26|8.4e+02,Ank|PF00023.26|34,Ank|PF00023.26|3e+03,Ank|PF00023.26|5.7e+03,Ank|PF00023.26|6.5e+03,Ank|PF00023.26|2.3e+02,Ank|PF00023.26|3e+02,Ank|PF00023.26|0.11,Ank|PF00023.26|9.4,Ank|PF00023.26|0.00053 R_Transcript_36161:1-2406(+)
ACTACAAATCCGCATTTTTCGAGAATACACTCAGACAACAAACTCCTAGAGAGAGAATATAGCAGAAAGAAAAAAAAAAAAAAGGAGGAAGAAAATGGAGGTAATGTGAAGGAGCTACCTGTCGAGGATAAAATCGTCATTTCAAACTTCTCGGCACGTTTTCCAATGCACGGAGGAGTGAGAGTGTACAACAACACTACCGGCAGGTTTCTTGCCGGAAAACAGATATTTCCGATGAGCTCCGGCGACGTTGAAGCTGCTTCTCAGAAACTCATCGACGCTTGTCTTGCTGGAGACACGAAGCTTTCTCTCGATCTCCTCGCTGATCCGCTCGTTGATATTGATTTCGTAGGTACGGTGAATTTGAGGTCCAGGAAAACGGAACTCGTTCCGTCTGGTGAGTCGACTCACCGAGTTGAAGTTGAGTACGAGGAGTTTAAGACCGAGGTTACGGCGCTGTTCCTCGCTTCTCACTCCGGGAATCTTCTCCTCGTTAGGAAATTGCTGAGTTTCGGGGCTGATGTGAACAAGAAACTGTTCCGTGGCTATGCAACTACAGCAGCAGTTAGGGAAGGTCATGTTGAAATTCTTGAAGCTCTTCTGAAAGCTGGGGCGTGTCAGCCAGCATGTGAAGAGGCATTAGTGGAGGCGAGTTATGTAGGGCGGGCAAGGCAAGCTGAATTACTTATGGGGTCCAACTTGATTAGCCAGCAGGTAGCAGTTCATGCCCTTGTCACTGCTTGCTCAAGGGGGTTTCTTGATGTTATTGATGTGTTGATTAAGTGTGGAGTGGATGCTAATGCAATGGATCGTATGCTGCTTCTATCATCCAAGCCTTATCTTCACATGAATGTTGACTGCAATGCAATTGTTGCCGCAATTGTCAATAGGCAGACTTCTGTGGTTGAATTACTTTTAAGGGTAGGTGTCCGAACAGACATGAAAGTGAGTTTAGGAGCCTGGTCATGGGACCCAGCCACTGGGGAAGAGTACAAAGTAGGTGCTGGACTAGCTGAACCTTATGACATCGCTTGGTGTGCAGTGGAGTATTTTGAAGAAAGTGGTAGTATCTTGCGACTGCTCCTTCAACACCTCTCTCCAAACACGCGTCATATGGGAAGGACCCTAATCTACCATGCTATCATATGTAACAATGCAGAAGCACTCAACGTGATATTGAGTTGTGGTGCAGATGCAGAATTTCCTCTAAAAACAGGCCAGGAAATTGAGATTCGTCCTATACATCTGGTTGCTCGGCTTGGGGCAGTGGATTCGCTTTGGCGTCTGATAAATGCTGGGTGCAATGTCAACTCCAGGAACCGTTCAGGAGAGACTGCTGTTATGATATGCACTAAATACAAGCATCAGGAATGTCTTAAAGCACTAGCCTCAGTAGGTGCCGACTTTGGTCTCGTAAATGCAGCAGGTGAGTCTACAACATCGATAGCAGGATCCACAAAGTGGGCATTAGGTTTCCAGCAACTAATCCTTGATGTCATTCGAGCCGGGCAAATCGTCAAGTCGAGCAACTCTACAGTATTCTCTTCTGCCATTTTTGTGGTCAAAGGAAACGATATTCAAGCATTGAAAATTCTTACAAAGCAACCAGGTGTTGCGCTTGATGACCAAGATGAAGATGGGTTCACAGCAGCCATGATTGCTGCATCAAGTGGTCAAGTAGAGGCCTTCCGTTTGCTTGTCTGCTCTGGAGCTGATGTATCGCTACGCAACAAGTATGGAGAAACAGCTTTTAGTTTGTCAGAGGAAAAGAACAGGGATCGAGAGGTTCTCGAAAAGATACTGTTGGATTATGCTCTTGAAAAAGGGAAACGTGTTCCCACCACCTCCTATGCCCTACATTGTGCAGCACGGCGTGGGGACTTGGTTTTAGTTCGCCGCCTAACAAGTATGGGTTATGACGTTAATGTCACCGACGTTGATGGCTACACCCCACTCATGTTAGCCGCAAAGGAAGGCTACGGAAACCTGTGTCACTTCCTAATCTCACGTGGTGCAAGATGTGACATCAAAAATGAGAGACGTGAGACAGCACTGTCACTAGCAAGGCAGAATGGTGTCCGTAGTGACGCAGAACAAGTGATACTGAATGAACTTGCACGGCAACTAGTACTGTGTGGTGATAGGGTGAAGAAACACACAAAAGGAGGCAAGGGGTCGCCTCATTCAAAGAAACTGAGGATGTTGGCAACGACTGGGGTCTTACGTTGGGGTAGATCTGCACGGAGGCTGAAGTGGGTCCAAGCTGGCTGTTCCTTCAAGACAGACCAAGAAAGCGCGGTGGATATGAGCCAGGCCTGTTTCATGTGGTCACTATCAACAACAAGGAGGTCCACTTTGTCTGCAAAGGTGGTGCAGAGGTGGCTAAGTTGTGGGTCAGAGGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36161.p1 GENE.R_Transcript_36161~~R_Transcript_36161.p1 ORF type:5prime_partial len:802 (+),score=116.14,Ank_2|PF12796.3|0.0017,Ank_2|PF12796.3|3.6e-07,Ank_2|PF12796.3|0.0018,Ank_2|PF12796.3|0.00013,Ank_2|PF12796.3|8.4e-06,Ank_2|PF12796.3|6.1e-08,Ank_2|PF12796.3|1.6e-08,Ank_5|PF13857.2|89,Ank_5|PF13857.2|80,Ank_5|PF13857.2|4.5,Ank_5|PF13857.2|1e+02,Ank_5|PF13857.2|13,Ank_5|PF13857.2|0.0032,Ank_5|PF13857.2|9.9e-07,Ank_5|PF13857.2|0.25,Ank_5|PF13857.2|7.2e-07,Ank_4|PF13637.2|0.00032,Ank_4|PF13637.2|7.4e+02,Ank_4|PF13637.2|67,Ank_4|PF13637.2|0.00016,Ank_4|PF13637.2|0.01,Ank_4|PF13637.2|0.0002,Ank_4|PF13637.2|1.9e-06,Ank_4|PF13637.2|1.5,Ank_3|PF13606.2|0.066,Ank_3|PF13606.2|3.1e+02,Ank_3|PF13606.2|0.037,Ank_3|PF13606.2|4.9e+03,Ank_3|PF13606.2|9.5e+03,Ank_3|PF13606.2|0.19,Ank_3|PF13606.2|1e+04,Ank_3|PF13606.2|6.8e+02,Ank_3|PF13606.2|0.34,Ank_3|PF13606.2|4.3,Ank_3|PF13606.2|0.013,Ank_3|PF13606.2|1.6e+04,Ank|PF00023.26|1,Ank|PF00023.26|8.4e+02,Ank|PF00023.26|34,Ank|PF00023.26|3e+03,Ank|PF00023.26|5.7e+03,Ank|PF00023.26|6.5e+03,Ank|PF00023.26|2.3e+02,Ank|PF00023.26|3e+02,Ank|PF00023.26|0.11,Ank|PF00023.26|9.4,Ank|PF00023.26|0.00053 R_Transcript_36161:1-2406(+)
TTNPHFSRIHSDNKLLEREYSRKKKKKKEEENGGNVKELPVEDKIVISNFSARFPMHGGVRVYNNTTGRFLAGKQIFPMSSGDVEAASQKLIDACLAGDTKLSLDLLADPLVDIDFVGTVNLRSRKTELVPSGESTHRVEVEYEEFKTEVTALFLASHSGNLLLVRKLLSFGADVNKKLFRGYATTAAVREGHVEILEALLKAGACQPACEEALVEASYVGRARQAELLMGSNLISQQVAVHALVTACSRGFLDVIDVLIKCGVDANAMDRMLLLSSKPYLHMNVDCNAIVAAIVNRQTSVVELLLRVGVRTDMKVSLGAWSWDPATGEEYKVGAGLAEPYDIAWCAVEYFEESGSILRLLLQHLSPNTRHMGRTLIYHAIICNNAEALNVILSCGADAEFPLKTGQEIEIRPIHLVARLGAVDSLWRLINAGCNVNSRNRSGETAVMICTKYKHQECLKALASVGADFGLVNAAGESTTSIAGSTKWALGFQQLILDVIRAGQIVKSSNSTVFSSAIFVVKGNDIQALKILTKQPGVALDDQDEDGFTAAMIAASSGQVEAFRLLVCSGADVSLRNKYGETAFSLSEEKNRDREVLEKILLDYALEKGKRVPTTSYALHCAARRGDLVLVRRLTSMGYDVNVTDVDGYTPLMLAAKEGYGNLCHFLISRGARCDIKNERRETALSLARQNGVRSDAEQVILNELARQLVLCGDRVKKHTKGGKGSPHSKKLRMLATTGVLRWGRSARRLKWVQAGCSFKTDQESAVDMSQACFMWSLSTTRRSTLSAKVVQRWLSCGSEA*

Click here to download the sequence:
Link to NCBI Protein BLAST