Transcript Information: R_Transcript_36171.p1


Annotated TAIR IDAT5G20610.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6969184-6972794 | Forward length=1164
E-Value4E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4589376046527
Replicate 21.2297833100975
Replicate 32.2906737596152
Condition 2: 8 Hour
Replicate 12.3786268805895
Replicate 23.1944116915979
Replicate 34.3823174212077
Condition 3: 24 Hour
Replicate 13.2468898793467
Replicate 22.2370334017585
Replicate 34.0023231427469


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36171.p1 GENE.R_Transcript_36171~~R_Transcript_36171.p1 ORF type:complete len:700 (+),score=197.43,NT-C2|PF10358.5|6.8e-18 R_Transcript_36171:423-2522(+)
ATGATGTCAAAATCTGAAGCTCGGAAGAAAAATAATGACGATTTAAATAATGGGAAGTTGTTAAATGAAATTGAAGCTATTAGCAAGGCCCTCTATTTGGACAAAAACCCATCCAAGAGTTCATCTTCTATAGCCAGGAATCGGCCTAAATCAGCTGATGGAGGCAATGCATTGTTACCCAATTCGAAGTCAAAGCATGTTACTGATGATCCATCATTGAAGGATAAAAAGTCATTTTGGAATTGGAAACCACTAAAAGCTCTTTCCCAGGTCAGAAATCGAAGGTTCAATTGTTGTTTCACTTTGGAAGTCCACAAAATAGCAGGCTTGCCCACTAAATTCAGCGGCCTTAGCCTTTCTGTACATTGGAAGAGGAGGGATGGAGAAGTAGTGACGAGCCCAATCAAGGTGGTGGAGGGTGTAGCTGAATTTGAAGAGAAATTGATTCATACTTGTTCAGTTTATGGGAGTAGGAGTGGGCCGCATCACTCTGCCAAGTATGATGCAAAGCATTTCTTGCTATATGCAGCAGTACTTGGAAATCCTAAGCTGGATTTGGGAAAGCATCGCATTGATCTTACAAGGCTGCTTCCTCTTACATTGGAAGAGTTGGAGGACGAGAAGAGCTCTGGAACTTGGACAACAAGTTTTAAGCTCTCGGGTGAGGCTAAAGGTGCTGTTATGAATGTTAGTTTTGGATATGTAGTGTTAGGAGACAGCCTTGCTCCTAATGACAAGAGTGTGCCTCAACTTTTGGAGTCAAAATCGACTATTAAGAGTCGCATGAAAACAGATCAATATGATGGGAAGGGCTCAATCCGCCGTGTTGGAAGCCTTCCAACAAGTCAAAAACAATCTATGACATCTCGTTCTATGAATGACATAAAAATTCTTCGTGAGGTTGTCCCTATAAAAACATCTGAAATCTCTAATTCTGCAAATACGCTGCGTGAAAAGTTTGATGAGGAAAAGTCAGTGGTGGATGAAAAGTGTGAAACTGCAGTATTTCTGGATGATTCCAAGCCTCTAAAACCAGCTTCCTGCTCTCCATCAGATTCATCTAAGGGACACATAGTTGATGAGAATGACAAGTTTGAAATTGCTGAGTCTCTAGATGATACCAAGTCTCTAAAACCAGCTTCCAGCTTGTCGTCAGATTCATCTAAGGGACTGATAGTTGATGCGAATGGTAAGTGTGAAATTGATACCAAACCTCTAAATCCAACTTCCAGTTTTCCATCAGATACATCTAAGGGGCACACAGTTGATGAGAGTGAAGATGCTGAATTTTCAGTTATTGAGAAAGGGATGGAGTCTTTCGGGGAAAAGCTTGGCTTGGATGAGGATAAGGCAAAGGATGCTGATGAGCTGGTTGTTAAGAGCCCTGATCTTCCTGTAGTTCACAGCAATGTGGAAGATGGTGCAGAAGATGGAGCTGATTTAAATAGAGAGAAAATTGTGTGCAGTAAAGAATCACTTTTAGAAGATCTGGAGTCTGCTTTGAGCCATGTTGCAGATCTTGAGAAAGAAGGATTAGACACCCCAGATGCTAAAAGTGAATCAAGTAATCAGGAAAACCAAATTGAAGAGGGAGCAAATGGCATGACTCAGACACTTAACTTGAATGATCTTGCAGACTCTGTTGCTGATGAGTTTCTAAGCATGCTTGGAGTAGAAGATGCTCCTTTTTGTTTTAGTTCTGATGCAGAACCTGAGTCCCCAAGAGAGCGTCTTTTAAGGGAATTTCAAAGAGAAGCTGAGGCCAGTGGATGCTCATTGTTTGGCTTTGATATTGACGAAGAAACTGATGCATATTACGATGAAGAAGATGTGGAAGATTATGATTATTATGCTCCCACTATATCTGGGTGGGAGGAATTTTCTGAGGAAATTGATTCCTTGCCAGTTGGTGAACCAGAATATCCTAAGATTAGGGCCAAGGTGATGGAGGATTTGGAGACACAAGCACTTATGGAAGAGTGGGGCTTGAGTGAGAATGCTTTCCATAGCTCTCCACCAAACAGCTCTGGTGGCTTGGCAGTCCAATCGATCTCCCTCCTACAGAGCCTTCTCCATTGCCTCCTCTTGCAGAAGGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36171.p1 GENE.R_Transcript_36171~~R_Transcript_36171.p1 ORF type:complete len:700 (+),score=197.43,NT-C2|PF10358.5|6.8e-18 R_Transcript_36171:423-2522(+)
MMSKSEARKKNNDDLNNGKLLNEIEAISKALYLDKNPSKSSSSIARNRPKSADGGNALLPNSKSKHVTDDPSLKDKKSFWNWKPLKALSQVRNRRFNCCFTLEVHKIAGLPTKFSGLSLSVHWKRRDGEVVTSPIKVVEGVAEFEEKLIHTCSVYGSRSGPHHSAKYDAKHFLLYAAVLGNPKLDLGKHRIDLTRLLPLTLEELEDEKSSGTWTTSFKLSGEAKGAVMNVSFGYVVLGDSLAPNDKSVPQLLESKSTIKSRMKTDQYDGKGSIRRVGSLPTSQKQSMTSRSMNDIKILREVVPIKTSEISNSANTLREKFDEEKSVVDEKCETAVFLDDSKPLKPASCSPSDSSKGHIVDENDKFEIAESLDDTKSLKPASSLSSDSSKGLIVDANGKCEIDTKPLNPTSSFPSDTSKGHTVDESEDAEFSVIEKGMESFGEKLGLDEDKAKDADELVVKSPDLPVVHSNVEDGAEDGADLNREKIVCSKESLLEDLESALSHVADLEKEGLDTPDAKSESSNQENQIEEGANGMTQTLNLNDLADSVADEFLSMLGVEDAPFCFSSDAEPESPRERLLREFQREAEASGCSLFGFDIDEETDAYYDEEDVEDYDYYAPTISGWEEFSEEIDSLPVGEPEYPKIRAKVMEDLETQALMEEWGLSENAFHSSPPNSSGGLAVQSISLLQSLLHCLLLQKV*

Click here to download the sequence:
Link to NCBI Protein BLAST