Transcript Information: R_Transcript_36175.p2


Annotated TAIR IDAT5G20610.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6969184-6972794 | Forward length=1164
E-Value5.4E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.774345269558
Replicate 210.520630187181
Replicate 313.881384881608
Condition 2: 8 Hour
Replicate 112.006987308178
Replicate 213.837890475595
Replicate 317.257634080197
Condition 3: 24 Hour
Replicate 114.649735661362
Replicate 210.909560607545
Replicate 314.29496772913


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36175.p2 GENE.R_Transcript_36175~~R_Transcript_36175.p2 ORF type:complete len:467 (+),score=139.86,LysM|PF01476.16|5.5e-09 R_Transcript_36175:2564-3964(+)
ATGAACCCTGCCCTTTTCAGGAGTTCTAAGACCGGTGGGAGCCTAATCATGCAGGTTTCTAGTCCAGTTGTAGTTCCTGCTGAATTAGGGTCTGAGATAATGGAAATACTGCAGCATTTGGCATCAGTGGGGCTTGAAAAATTGTCTGCTCAAGCCAATAAGTTAATGCCTTTGGAAGATATTACGGGGAAAACAATGGAACAAATAGCTTGGGAAGCAGTACCTGGTTTGGAAGCTTCTGAAAGGAAAACTCTGGCTCAGACTGAGCAAGAAGGTGTTCATATATCATCTACTGCAAAAAAAAGGAGTAAGGGGGCTTCTGCTAGCCAAAAATCAAAGAAATCTATGTCAAGCGGTGCACTTGATGATGTGGATTCTGAATATGTATCTCTTGAAGATCTAGCTCCCTTGGCCATGGATAAGATTGAAGCATTATCAATTGAGGGTTTGAGAATACAGTCTGGCATGTCAGATGAGGAGGCACCTTCAAACATCAGTGCACAGTCTATCAGAGAATTCTCAGCCCTTGAAGGCAGAAGTGTGAATTCCACTGCATTCATGGGCTTGGAAGGAGCAGCAGGATTGCAGCTTTTGGACCTGAAGGACAGTGCAGCTGATGGCACTGATGGACTCATGGGTCTATCTTTAACGCTGGATGAATGGATGAGGCTGGATTCTGGTGAAATTGACGAAGAAGAGCAAATGAGTGAGAGAACTTCAAAACTTCTTGCTGCCCACCATGCTAAGTGTACAGATTTGAATTTTCTGGGTAAGAAAAAGCAGGGCAAAGCCTCTGGAAGTAAGTGTGGTTTGTTGGGCAACAACTTCACTGTTGCCTTGATGGTCCAGCTACGTGATCCGTTAAGGAACTATGAGCCAGTTGGCACGCCAATGCTTGCTCTTATTCAAGTGGAAAGGGTTTTTCTTCCTCCAAAACCAGAGATATACGGCACGGTTGCACAGGCAGGAGACTGTAATGATGAAGATGATGAGCTTGAGTCAGTTGCCAAGGAAGATACAAAAGTGGAGCCTAAGGAAGAGAAAATCCAGGAACAAGAATTAATTCCTCAGTACAAAATCAGTGAAGTGCATGTTGCTGGTCTGAAAACTGAACCTGGTAAGAAAAAGTTATGGGGCAGTGCGGCACAGCATCAATCTGGATCCCGTTGGTTGCTCGCCAACGGAATGGGGAAAAGCAACAAGCATCCATTTTTGAAATCCAAATCTGCTGCAAAATCTCCTTTGCCAGCCACAGTTACAGCTCAGCCTGGTGATACTTTGTGGAGTATTTCTGCTCGATTTCATGGAAATGGGGCAAAATGGAAGGAATTGGCTGCTCTTAATCCTCACATTAGGAACCCAAATGTTATTGTTTCAAATGAAACCATCAAGCTACGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36175.p2 GENE.R_Transcript_36175~~R_Transcript_36175.p2 ORF type:complete len:467 (+),score=139.86,LysM|PF01476.16|5.5e-09 R_Transcript_36175:2564-3964(+)
MNPALFRSSKTGGSLIMQVSSPVVVPAELGSEIMEILQHLASVGLEKLSAQANKLMPLEDITGKTMEQIAWEAVPGLEASERKTLAQTEQEGVHISSTAKKRSKGASASQKSKKSMSSGALDDVDSEYVSLEDLAPLAMDKIEALSIEGLRIQSGMSDEEAPSNISAQSIREFSALEGRSVNSTAFMGLEGAAGLQLLDLKDSAADGTDGLMGLSLTLDEWMRLDSGEIDEEEQMSERTSKLLAAHHAKCTDLNFLGKKKQGKASGSKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFLPPKPEIYGTVAQAGDCNDEDDELESVAKEDTKVEPKEEKIQEQELIPQYKISEVHVAGLKTEPGKKKLWGSAAQHQSGSRWLLANGMGKSNKHPFLKSKSAAKSPLPATVTAQPGDTLWSISARFHGNGAKWKELAALNPHIRNPNVIVSNETIKLR*

Click here to download the sequence:
Link to NCBI Protein BLAST