Transcript Information: R_Transcript_362408.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value6E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60340366792459
Replicate 21.2146620075544
Replicate 32.4610544524792
Condition 2: 8 Hour
Replicate 11.4165376415762
Replicate 22.2176081164812
Replicate 31.8001597309475
Condition 3: 24 Hour
Replicate 11.7076054962755
Replicate 20.91137433432138
Replicate 31.8089012137932


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_362408.p1 GENE.R_Transcript_362408~~R_Transcript_362408.p1 ORF type:complete len:121 (+),score=14.04,zf-RVT|PF13966.2|1.6e-17 R_Transcript_362408:498-860(+)
ATGAAAATCAGAGAGGCTGAAGTTGTCACAAATGGGGTATGGCCTTCTTCTTCTGGGCAATACTCTATAAAAGAGGCTCACAAGAGTCTACTGGGTGTGAGACCTAACTTTTCTTATTGTAAATTGGTGTGGGGGAGATACTCTTTGCCTAAACATGGTATTTTCCTATGGTTAGCAGTTCAATCAAGGCTGCTGACAAAAGATAGGCTGCTAAAATTCAAGGTGGATGTGCCTGACAAGCTATGCGTGTTCTGTAACAGGGCAGAGGAATCTAATCCTCATTTGTTCTTTGAATGCCAGTATTCTCTGACAATATTGACAGGTATTGCAGACTGGTTGAAAATGGGGAAATGCCCTACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_362408.p1 GENE.R_Transcript_362408~~R_Transcript_362408.p1 ORF type:complete len:121 (+),score=14.04,zf-RVT|PF13966.2|1.6e-17 R_Transcript_362408:498-860(+)
MKIREAEVVTNGVWPSSSGQYSIKEAHKSLLGVRPNFSYCKLVWGRYSLPKHGIFLWLAVQSRLLTKDRLLKFKVDVPDKLCVFCNRAEESNPHLFFECQYSLTILTGIADWLKMGKCPT*

Click here to download the sequence:
Link to NCBI Protein BLAST