Transcript Information: R_Transcript_36274.p1


Annotated TAIR IDAT5G16000.1
Annotated Gene NameNSP-interacting kinase 1
Annotated Gene Symbol(s)NIK1
Annotation TypeOrtholog
Chromosome Positionchr5:5224264-5227003 | Forward length=638
E-Value6.6E-246
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.734816553016
Replicate 211.188504756984
Replicate 313.037621625021
Condition 2: 8 Hour
Replicate 113.658781807307
Replicate 214.704434770848
Replicate 318.192770735172
Condition 3: 24 Hour
Replicate 110.828172116468
Replicate 28.7520868613402
Replicate 312.507259821084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36274.p1 GENE.R_Transcript_36274~~R_Transcript_36274.p1 ORF type:5prime_partial len:441 (+),score=67.85,Pkinase|PF00069.21|5.9e-44,Pkinase_Tyr|PF07714.13|7.2e-43 R_Transcript_36274:2-1324(+)
TCTCCCAGATTCCAAGCAAAAACCTTCAGTATTGTAGGAAATCCTCGAATATGTGCCACGGGGAGCGAAAAGGATTGTTTTGGGACATCACAATTGCCACTTTCTTTCAATGTGAATGGTTCAGATAGTTCTCAGCCTCCTCTAAAGCCTAAAGGTCATGCTAAACTTGCCTTGGCCCTTGGTACAAGTCTAGGCTGTGTTTGCTTGCTAATTGTTGGGTTTGGACTACTTTTATGGTGGAGACACAAGCACAACCAGCAGATATTCTTCGATATGAACGATCGACATCATGAAGAAGTTTGCCTAGGAAACTTGAGGAGGTTCCAGTTCCGGGAACTTCAGAGTGCCACAGGCAACTTTAGCAGCAAAAACATACTTGGAAAAGGCGGCTTTGGGATAGTATACAAAGGCACACTACCAGATGGGACTATTGTGGCTGTAAAACGGCTCAAGGATGGGAACGCCATTGGTGGGGAAATTCAATTTCAAACTGAAGTTGAGTTGATCAGCTTAGCAGTGCACAGGAACCTTCTACGCCTCAATGGCTTTTGTATGACAGCAACAGAACGGCTTTTGGTTTACCCTTATATGTCTAACGGAAGTGTTGCTTCTCGCCTTAAAGCAAAGCCAGCTTTAGACTGGGTTACCAGAAAGAGAATTGCATTAGGCGCAGCAAGGGGTCTGTTGTACCTTCATGAGCAATGTGACCCGAAGATAATACATAGGGATGTCAAGGCTGCGAATATTCTGCTTGATGAATACTGTGAGGCCGTAGTCGGAGATTTTGGACTGGCTAAGCTCTTGGACCACCAGGATTCACATGTTACGACAGCTGTTAGGGGCACCGTTGGTCATATAGCTCCAGAATATCTCTCAACAGGACAGTCGTCAGAGAAGACCGATGTCTTTGGATTTGGAATCCTTCTACTTGAGTTGATTACAGGCCAGAGAGCACTAGATTTCGGCAAAGCAGCAAACCAGAAAGGAGCCATGCTAGATTGGGTGAGGAAAATTCACCAAGAAAAGAAGTTGGATACCCTGGTTGACAAGGACTTGAGGAACGACTATGACAGGATTGAGCTTGAGGAAATAGTCCAAGTGGCTCTTTTATGTACACAATTCCAACCAAGCCAAAGACCTAAAATGTCAGAAGTGGTAAGGATGCTCGAGGGAGATGGCCTGGCAGAGAAATGGGAGGCTTCTCAAAGAGCTGAATCGACAAGGAGCAGAGGGAACGAGTTCTCCTCTTCAGAGCGATACTCTGACCTTACTGATGATTCTTCGTTGCTCGTCCAAGCAATGGAGCTTTCTGGACCAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36274.p1 GENE.R_Transcript_36274~~R_Transcript_36274.p1 ORF type:5prime_partial len:441 (+),score=67.85,Pkinase|PF00069.21|5.9e-44,Pkinase_Tyr|PF07714.13|7.2e-43 R_Transcript_36274:2-1324(+)
SPRFQAKTFSIVGNPRICATGSEKDCFGTSQLPLSFNVNGSDSSQPPLKPKGHAKLALALGTSLGCVCLLIVGFGLLLWWRHKHNQQIFFDMNDRHHEEVCLGNLRRFQFRELQSATGNFSSKNILGKGGFGIVYKGTLPDGTIVAVKRLKDGNAIGGEIQFQTEVELISLAVHRNLLRLNGFCMTATERLLVYPYMSNGSVASRLKAKPALDWVTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGKAANQKGAMLDWVRKIHQEKKLDTLVDKDLRNDYDRIELEEIVQVALLCTQFQPSQRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNEFSSSERYSDLTDDSSLLVQAMELSGPR*

Click here to download the sequence:
Link to NCBI Protein BLAST