Transcript Information: R_Transcript_363614.p1


Annotated TAIR IDAT5G06540.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1999181-2001049 | Reverse length=622
E-Value2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2724322530555
Replicate 20.3133776181537
Replicate 30.22792773727515
Condition 2: 8 Hour
Replicate 10.12182022361814
Replicate 20
Replicate 31.1739847664927
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.43557621267457


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_363614.p1 GENE.R_Transcript_363614~~R_Transcript_363614.p1 ORF type:5prime_partial len:201 (+),score=30.71,PPR_2|PF13041.2|68,PPR_2|PF13041.2|4.4e-11,PPR_2|PF13041.2|0.058,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|1.1e-10,PPR|PF01535.16|1.3,PPR|PF01535.16|0.00034,PPR|PF01535.16|56,PPR|PF01535.16|0.031,PPR|PF01535.16|9.7e-08,PPR|PF01535.16|2.7e-09,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|6.7,PPR_1|PF12854.3|4.1e-07,PPR_1|PF12854.3|0.00021,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|2.7e-06 R_Transcript_363614:2-604(+)
AAGTTCTGTGCCTTGTCAAAATTTGGTGACTTGGGTTATGCACACCAACTGTTTGATGAAATGCCGCACCCAGATGCATTCATCTACAACACCCTCATTAGGGGCTACTTGCAATGCCACTTGGCCAGGGAATGCTTTCTTTTGTATCTCCGAATGTTGGAGGCCTCTGTTATGCCCAACAACTTCACCTTCCCCTCCCTTATCAGATGTTGTTGCTTTCACAATGATTGGGTTGAACAAGGGCGGCAAATCCATGCTCAAGTGGTGAAATTTGGGTTCACAGATGACGGATTTTGTCAGAACAATTTGATTTACATGTATGTGACTTTTGGGTATTTGGAAGAAGCTCGAAGTGTGTTCGATACCATGTCTTGTAAGGATGCTATCTCTTGGACTACCTTGATCAGTGGGTATTCTCAATTGGGTCTTGTAAATGATGCCTTTGAAGTGTTTAGATTGATGCCTAATAAAAATTCTGCTGCTTGGAATGCGATGATAGCTGCATATGTTAAACATAACCGCTTTCATGAGGCATTTTCTTTGTTCAATGAAATGAGGGCTGAGAATATAGAGTTGGATAAGTATGTGATAGCTAGTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_363614.p1 GENE.R_Transcript_363614~~R_Transcript_363614.p1 ORF type:5prime_partial len:201 (+),score=30.71,PPR_2|PF13041.2|68,PPR_2|PF13041.2|4.4e-11,PPR_2|PF13041.2|0.058,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|1.1e-10,PPR|PF01535.16|1.3,PPR|PF01535.16|0.00034,PPR|PF01535.16|56,PPR|PF01535.16|0.031,PPR|PF01535.16|9.7e-08,PPR|PF01535.16|2.7e-09,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|6.7,PPR_1|PF12854.3|4.1e-07,PPR_1|PF12854.3|0.00021,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|2.7e-06 R_Transcript_363614:2-604(+)
KFCALSKFGDLGYAHQLFDEMPHPDAFIYNTLIRGYLQCHLARECFLLYLRMLEASVMPNNFTFPSLIRCCCFHNDWVEQGRQIHAQVVKFGFTDDGFCQNNLIYMYVTFGYLEEARSVFDTMSCKDAISWTTLISGYSQLGLVNDAFEVFRLMPNKNSAAWNAMIAAYVKHNRFHEAFSLFNEMRAENIELDKYVIASM*

Click here to download the sequence:
Link to NCBI Protein BLAST