Transcript Information: R_Transcript_363728.p1


Annotated TAIR IDAT1G06150.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)EMB1444
Annotation TypeOrtholog
Chromosome Positionchr1:1867129-1873194 | Reverse length=1322
E-Value5.2E-221
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28274810428996
Replicate 20.14455284279723
Replicate 30.11827919584932
Condition 2: 8 Hour
Replicate 10.63216518796674
Replicate 20.53881642990809
Replicate 30.90601843027749
Condition 3: 24 Hour
Replicate 10.35562868338956
Replicate 20.37960858675692
Replicate 30.489742101428


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_363728.p1 GENE.R_Transcript_363728~~R_Transcript_363728.p1 ORF type:complete len:581 (+),score=100.20,PPR|PF01535.16|9e+03,PPR|PF01535.16|0.00057,PPR|PF01535.16|86,PPR|PF01535.16|0.0041,PPR|PF01535.16|0.059,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|3.7e-09,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.47,PPR|PF01535.16|0.00063,PPR|PF01535.16|0.0024,PPR|PF01535.16|0.001,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|3,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|6.6e-13,PPR_2|PF13041.2|0.077,PPR_2|PF13041.2|0.76,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|4.8e-12,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|0.0095,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|1.7e+02,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.0046,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|0.0066,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.75,PPR_1|PF12854.3|0.74,PPR_1|PF12854.3|0.0053,PPR_1|PF12854.3|8.1e+02,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.88,PPR_3|PF13812.2|9.8e+02,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|8.3,PPR_3|PF13812.2|0.0026,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|51,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|1.2 R_Transcript_363728:34-1776(+)
ATGATCGCGCAACACTTGCAAAAGAACAGAACTTACTTGAGCCAATTTTTTCTGCGTAGAATTGTACGCAACAAACTCATCCACACCCAACCCATAGTCGCCCATTTGAAGAGCTGTTCAAGTCTTCCATTTTTGCAATCCCTTCAAGCCTTCATGATAAAGTCCAATACAATAGAAGATTGTTACCTGATGAACCAATTTGTTAGCGCCTGTTTCACCATCAATCAGATAGACTATGCAGCTTCAGCCTTTGCCCAGATGGAATGTCCAAATGTTTTCGTGTATAATGCATTGATAAAAGGCACAGTTAATTGTGGCAAGCCAGTACGAGCTTTGGAATTATACTTAGAGATGTCGAGGGCTGAAGTTTATCCTACCAGTTACACCTTTTCTTCATTAATTAAGGCTTGTGGCCAAATATTAGCTTTGAATTGTGGAAACTCTCTTCATTGCCAGGTTTGGAAAAATGGGTTTGATTCTCATGTTTTTGTGTTGACCTCTTTGGTTGATTTTTATGGGAAAGTAGATAGAGTTGTGGAAGCACAGAAGGTGTTCGATGAAATGCCTGAAAGAGACCCTTTTGCGTGGATTACCATGCTTACGGTTTTTACGCAACGTAAAGATATGTACTCAGCAAGGCGCTTGTTTTATGAGATGCCTGAAAGGAATGTTACTGCTTGGAATTCTATGGTTGATGGGTATGCAAGGGTTGGGGATGTTGAGTCTGCTGCGTTGTTATTTAGCCAAATGCCTAAGAAGGATTTGATTTCTTGGACTACAATGATCACTTGTTATTCTCAAAACAAGCAATATAAAGAGGCATTATCTGTATTTGATGAGATGTTCAAGAATGGAATCAGCCCAGATGAGATAACACTGGCAACAGTTCTCTCATGTTGTGCACATCTTGGAGCCCTTGACCTAGGCAAGGGAATTCATTTTTACATCATGCAAAAGGGGCTTTACCTTGATGTTTATGTGGGTTCTGCTCTGATAGATATGTATGCAAAGTGTGGGAGATTAGATAGATCACTCATTGTGTTTCTCAATTTGAGGGTGAAAAATCTGTATTGTTGGAATTCAATAATTGAAGGGCTTGCTGCTCATGGGCATGGAAAATCAGCTCTGGTGATGTTTCATAGAATGCTGAAGGAGACTGTGAAGCCTAATGGTGTAACATTTGTGAGTGTTCTCAGTGCATGCACTCATGCAGGACTAGTAGAGGAGGGACGTGAGATATTCCAGAGCATGATTCATGACTTTCAGATTTATCCACGGATAGAGCACTTTGGTTGCATAATTGATCTACTTTGCAAAGCTAAGTTGCTCGAGGAAGCCTTGGAAGTGATCAAAAGTATGGAAACTGAACCTAATTCGGTTATTTGGGGAGCCTTGTTGAGTGGCTGTAAGCTTTGCAAGAACTTAGAGATAGCTGAAATTGCTGCTACCAAGTTAATGGAATTGGAGCCAGAAAATTGTGGTTACCACACCCTGTTAGTTAATATGTATGCTGAAGCAAATAGATGGAAAGAGGTTGCCAAGATAAGGACTATGATGAGGGAACTAGGTGTAGAGAAAAGATGTCCTGGGTCTAGTTGGATTGAAATGGATAATGAATTGCATCAGTTCATTGCTGGTGATAAATCACACACTGCTTCAAGTGAGATACACATTTTGCTGGATGAACTGTATGGAAAGCTAAAGCTGCCTGACAATCTAGCTGAGTCTGTGGATATTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_363728.p1 GENE.R_Transcript_363728~~R_Transcript_363728.p1 ORF type:complete len:581 (+),score=100.20,PPR|PF01535.16|9e+03,PPR|PF01535.16|0.00057,PPR|PF01535.16|86,PPR|PF01535.16|0.0041,PPR|PF01535.16|0.059,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|3.7e-09,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.47,PPR|PF01535.16|0.00063,PPR|PF01535.16|0.0024,PPR|PF01535.16|0.001,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|3,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|6.6e-13,PPR_2|PF13041.2|0.077,PPR_2|PF13041.2|0.76,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|4.8e-12,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|0.0095,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|1.7e+02,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.0046,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|0.0066,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.75,PPR_1|PF12854.3|0.74,PPR_1|PF12854.3|0.0053,PPR_1|PF12854.3|8.1e+02,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.88,PPR_3|PF13812.2|9.8e+02,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|8.3,PPR_3|PF13812.2|0.0026,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|51,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|1.2 R_Transcript_363728:34-1776(+)
MIAQHLQKNRTYLSQFFLRRIVRNKLIHTQPIVAHLKSCSSLPFLQSLQAFMIKSNTIEDCYLMNQFVSACFTINQIDYAASAFAQMECPNVFVYNALIKGTVNCGKPVRALELYLEMSRAEVYPTSYTFSSLIKACGQILALNCGNSLHCQVWKNGFDSHVFVLTSLVDFYGKVDRVVEAQKVFDEMPERDPFAWITMLTVFTQRKDMYSARRLFYEMPERNVTAWNSMVDGYARVGDVESAALLFSQMPKKDLISWTTMITCYSQNKQYKEALSVFDEMFKNGISPDEITLATVLSCCAHLGALDLGKGIHFYIMQKGLYLDVYVGSALIDMYAKCGRLDRSLIVFLNLRVKNLYCWNSIIEGLAAHGHGKSALVMFHRMLKETVKPNGVTFVSVLSACTHAGLVEEGREIFQSMIHDFQIYPRIEHFGCIIDLLCKAKLLEEALEVIKSMETEPNSVIWGALLSGCKLCKNLEIAEIAATKLMELEPENCGYHTLLVNMYAEANRWKEVAKIRTMMRELGVEKRCPGSSWIEMDNELHQFIAGDKSHTASSEIHILLDELYGKLKLPDNLAESVDID*

Click here to download the sequence:
Link to NCBI Protein BLAST