Transcript Information: R_Transcript_36388.p1


Annotated TAIR IDAT1G67980.1
Annotated Gene Namecaffeoyl-CoA 3-O-methyltransferase
Annotated Gene Symbol(s)CCOAMT
Annotation TypeOrtholog
Chromosome Positionchr1:25487724-25488934 | Forward length=232
E-Value1.8E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.54677865667443
Replicate 30.83514147485972
Condition 2: 8 Hour
Replicate 11.4028360126026
Replicate 20.81524048379322
Replicate 31.1344756637742
Condition 3: 24 Hour
Replicate 10.95657530115434
Replicate 21.0338402604958
Replicate 31.5959784667529


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36388.p1 GENE.R_Transcript_36388~~R_Transcript_36388.p1 ORF type:3prime_partial len:192 (+),score=46.51,Methyltransf_3|PF01596.13|5.1e-74,Methyltransf_24|PF13578.2|6e-11,Methyltransf_18|PF12847.3|5.8e-06 R_Transcript_36388:218-790(+)
ATGGCAATGGACTTGAACGCCATCAAGGAGAAGACCATTCTCAGCAGCCCAGCTCTTGTAGAGTACATCTTGGAAACTAGTGGATTCCCACAAGAGCATGAGCTTCTCAAGGAAATCAGAGAAGCCACTGTGGAAAAATATAAACACATGAGCATAATGAACGTGTCTGTTGATGAGGCACAATTGCTTTCAATGTTATTGAAGCTCATGAATGCAAGGAATACCTTGGAAGTTGGTGTTTTCACAGGATATTCACTACTTGCTACCGCCTTGGCTCTCCCGGAGGACGGCAAGGTCATAGCAATTGATCCAGATAGAAAGGCCTATGAGCTGGGATTACAATCCATTAAAAAGTCGGGGGTTGAGCATAAGATTGAATTTGTTAAGGGAGCTGCCATGCCATACTTGAATGAACTCGTTAACAATGGAAAAGAAGGGATGTTTGATTTTGCATTTGTAGATGCCGACAAGGCAAACTACATCAACTATCATGAGCCATTGTTAAAGTTGGTGAAAGTTGGTGGAGTGATTGCATATGACAACACCCTTTGGATGGGCTCAGTTGCATTGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36388.p1 GENE.R_Transcript_36388~~R_Transcript_36388.p1 ORF type:3prime_partial len:192 (+),score=46.51,Methyltransf_3|PF01596.13|5.1e-74,Methyltransf_24|PF13578.2|6e-11,Methyltransf_18|PF12847.3|5.8e-06 R_Transcript_36388:218-790(+)
MAMDLNAIKEKTILSSPALVEYILETSGFPQEHELLKEIREATVEKYKHMSIMNVSVDEAQLLSMLLKLMNARNTLEVGVFTGYSLLATALALPEDGKVIAIDPDRKAYELGLQSIKKSGVEHKIEFVKGAAMPYLNELVNNGKEGMFDFAFVDADKANYINYHEPLLKLVKVGGVIAYDNTLWMGSVALP

Click here to download the sequence:
Link to NCBI Protein BLAST