Transcript Information: R_Transcript_36402.p1


Annotated TAIR IDAT3G10405.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: chloroplast; Has 44 Blast hits to 44 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3233978-3235118 | Reverse length=212
E-Value7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.253206462219
Replicate 212.442252098547
Replicate 316.826554160137
Condition 2: 8 Hour
Replicate 111.184901272198
Replicate 211.870591594703
Replicate 312.885402600892
Condition 3: 24 Hour
Replicate 113.462911645876
Replicate 29.6661937113024
Replicate 310.808743055258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36402.p1 GENE.R_Transcript_36402~~R_Transcript_36402.p1 ORF type:complete len:162 (+),score=26.75 R_Transcript_36402:124-609(+)
ATGGCTATGGCCACTGCCACTACTTGGCATCAAATTTTTATCACTGGATTCACTTCAAAACTTCCATTTCCGCCCTCATTTCTGCTGACCCGTTTCTCAGTTCGCCCAGTTCGCCCAAACTCACATCTTTCCTCTTCCTCTTCCTTGTCAGTGAGGAAAGTTCACCATCGTTTGAGAGTCTCCTCCGAAGAATACCCGAGCGAGGGAATTGAAGATTCGAAGTTTGTTCCTCTAAATCCTGAAGATCCAAGATATGGCCCCCCTGCCTTACTGCTGTTGGGATTCAAAGTGGAAGAGGCAGATAAGATACAACAACTTTTGAAGGACATGGATGGAGACTTCTTGAAGGTTATCTACTGCACTGAAGACCTGATTACTCGCTCGCTTTGGGATGCAGTGAACATTACACAAGAAAGTCTGGAAAATATTAAGTTGATAGGGGCTAAGATTACTTGCTTGGCATCGTCTGAAGCTCTGTATCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36402.p1 GENE.R_Transcript_36402~~R_Transcript_36402.p1 ORF type:complete len:162 (+),score=26.75 R_Transcript_36402:124-609(+)
MAMATATTWHQIFITGFTSKLPFPPSFLLTRFSVRPVRPNSHLSSSSSLSVRKVHHRLRVSSEEYPSEGIEDSKFVPLNPEDPRYGPPALLLLGFKVEEADKIQQLLKDMDGDFLKVIYCTEDLITRSLWDAVNITQESLENIKLIGAKITCLASSEALYQ*

Click here to download the sequence:
Link to NCBI Protein BLAST