Transcript Information: R_Transcript_3642.p1


Annotated TAIR IDAT3G15820.1
Annotated Gene Namephosphatidic acid phosphatase-related / PAP2-related
Annotated Gene Symbol(s)ROD1
Annotation TypeOrtholog
Chromosome Positionchr3:5351217-5353573 | Forward length=301
E-Value2.6E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.130698823808
Replicate 229.121581056852
Replicate 329.417899310127
Condition 2: 8 Hour
Replicate 141.173149620196
Replicate 253.37511864146
Replicate 362.536028370237
Condition 3: 24 Hour
Replicate 161.561517326343
Replicate 258.00835215056
Replicate 357.417745856724


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3642.p1 GENE.R_Transcript_3642~~R_Transcript_3642.p1 ORF type:complete len:292 (+),score=30.68,PAP2_3|PF14378.2|1.7e-43,PAP2_C|PF14360.2|9.3e+03,PAP2_C|PF14360.2|3.6e-06 R_Transcript_3642:1072-1947(+)
ATGAACAACGGCGTTACTCCCAATGTACTTCGCAATAGAATCTCTCCCTCCATCACCACCACCACCACCACCAACGGCATTAACCACCATTGTAACGGTAACGGAAAAGCTAACGGTAACGAGGAGACAACAACAACAACAACAATGAAAGATAAGAGAGGGGGGATAATGGGGTGGTTGGAAACGGCGTCGTGTATGAAATGGGGATATGATGACGTGGTAGGGGCAGTGAAATATCATCCAATACCATGTATGTTTGCAATGTCCTTGTTGTTCTTCATGGGCGTAGAGTACACTCTCCTTATGGTCCCTTCTTCTTCCCCTCCTTTTGATCTGGGTTTCGTTGCCACGCGCTGGCTTAATCGCGTCTTTGCTGCCACCCCTGCTCTCAACACCATCTGCGCCGCCCTTAATACGGTGTTTGTGGGGATGCAAACGGGGTACATATTCTGGGTGTTTCTAGTGGAAGGAAGGCCAAGACCTGGACTTGCTGCCATGTTTATGTTCACTTGTAGGGGTATTCTTGGTTACTCCACTCAGCTCCCTTTGCCTGAGGACTTCTTGGGTTCAGGTGCGGATTTTCCGGTTGGAAATGTGTCATTCTTCCTCTTCTATTCGGGACATGTTGCTAGCGCTGTGATTGCGTCATTGGACATGAGACGCATGCATAGGAAGGCGTTGGCATGGACATTTGATTTCCTTAACGTCTTACAAGTGGTGAGGCTACTGGGTACAAGAGGTCACTACACAATTGACCTAGGTGTTGGTGTTGGTGCTGGCATCTTGTTCGACTATCTTGCTGGCAAGTATGAGGAGAGCCGGAAAATGTCACTAGGATCTCCTTCCAGCACAATGATCTACTCTCCATTGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3642.p1 GENE.R_Transcript_3642~~R_Transcript_3642.p1 ORF type:complete len:292 (+),score=30.68,PAP2_3|PF14378.2|1.7e-43,PAP2_C|PF14360.2|9.3e+03,PAP2_C|PF14360.2|3.6e-06 R_Transcript_3642:1072-1947(+)
MNNGVTPNVLRNRISPSITTTTTTNGINHHCNGNGKANGNEETTTTTTMKDKRGGIMGWLETASCMKWGYDDVVGAVKYHPIPCMFAMSLLFFMGVEYTLLMVPSSSPPFDLGFVATRWLNRVFAATPALNTICAALNTVFVGMQTGYIFWVFLVEGRPRPGLAAMFMFTCRGILGYSTQLPLPEDFLGSGADFPVGNVSFFLFYSGHVASAVIASLDMRRMHRKALAWTFDFLNVLQVVRLLGTRGHYTIDLGVGVGAGILFDYLAGKYEESRKMSLGSPSSTMIYSPLK*

Click here to download the sequence:
Link to NCBI Protein BLAST