Transcript Information: R_Transcript_36458.p1


Annotated TAIR IDAT3G48440.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17941402-17943576 | Forward length=448
E-Value4E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.318856668373
Replicate 211.611028322087
Replicate 311.412897530238
Condition 2: 8 Hour
Replicate 113.194679874399
Replicate 213.827400431829
Replicate 314.944612277562
Condition 3: 24 Hour
Replicate 114.804946357088
Replicate 214.924318295214
Replicate 314.888279689851


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36458.p1 GENE.R_Transcript_36458~~R_Transcript_36458.p1 ORF type:complete len:566 (+),score=137.16,zf-CCCH|PF00642.20|1.5e-09,zf-CCCH|PF00642.20|4.9e-07,zf-CCCH|PF00642.20|1.6e-07,zf-CCCH|PF00642.20|3.2e-07,zf-CCCH|PF00642.20|9.7e-06,zf-CCCH|PF00642.20|7.3e-06 R_Transcript_36458:198-1895(+)
ATGGGGACTTGTGAAGAAAGCAATCCATCCCTTGAAACCCAGGACCACGAAACTCCTAATCTGGAGTTGATGAATGGTGGGTCCCACCTCCACAACATTGTTGTAGAACAAGAACAACAACATGATGATGATGATGTTGATGTTGATAATGAAGATGATGATCATGAAAATCATGATGGACATCAAGAAGAAGAAGAAGGTGTTACTGTTGAGCTCGATAGCTTACAGTTAGAGGGCAATGACAATGGCAATATCGAGGAAGAAAAACAAGAAGAAAAAGGAGAAAAAAAAGAAGATGAAGAAACCCAAAATTACCCTTTACGCCCTAATGCTGTAGATTGTACCTTCTATCTAAAGACTGGAACTTGCAAATTTGGGTTAAACTGCAGGTTCAATCACCCCCCTAAAAGGATTTTTCAGGCTGTTGTAGGGGACAAGGAGAAAGGCACAGAGGAGAGCAATGGGATGGAGGTTCCTGATACTGGGAAAATTGATTGCAAGTATTTCTCAACTCCAGGAGGGTGCAAGTATGGGGATGCTTGCAGATATAATCACTCTGAAGAGAAGGTTGAGGCGAAAACTCTGGAGCTTAATTTTCTGGGTCTACCAATACGGCCGTTGGCAAAAGAGTGCAGCTTCTACCTGCGCAATGGTACTTGTGGCTATGGCACTAATTGTAGGTTCAATCATCCTGATCCTACAGTAGCAAAAGAATCCGAGCCAGGACACGTGCTGGCTAATGGTGACTCTTTGAGAGGTGTCAGCAATCTTCCTAAAACTTATGAATCATTGCACCCTTCTGGGGTGTCGCAAACTCAAAGTAACTTGCCCCCGTTTTCGAATGGCATGAACATGGGGAATTCTTTACCTTATGCTACTGGGATGAGTTCTTATCCTCATGGAATGTCCCAAACTCGTGGATGGAACCAAAATCAGTTCTCTATGTCGTCAGCAAACATGCCTCCTCTTCCACATCAAATGTTGAACAACTTTTCGAAGAAAACAGATCCTTCACCACATCATGAATATCTAATGCAGATAGAAGAATTCCCTGAACGACCAGGTCAGCCTGATTGTGATTATTTTATGAAAACCGGAGACTGCAAATACAGATCTGCATGCAAATATAACCATCCAATGAGCAGAGCCCCTAAGCTACGTCTGCCTCCGCTCTCTGTGAAAGGCTCATATTCAAGATCTGCAGCTGGATTACCTGTACAGACTACTGAGCTTTCTAACTCGAATCCAAATGGTGTGCCTTCTACTCATCATCAACAGCAGATGCAGAATGGAGAGTTTCCTGAAAGGCCTGGACAGCCAGAATGTGAATACTACATGAAAACTGGAAATTGCAAATTCAGATCTGCTTGTCGATACCATCATCCAAGAAACCGAGTGTCAACAACATCAACCGCATCTAGCCTCAACGGAAAGGGCCTTCCCTTAAGACCTGGTAGTAGAATCTGCCGGAACTATGAGCAGCAAGGTACTTGTGGATATGGTCACAAATGTCTGTTTCATCATCCTGATGATATTAGCTTGCCGGCTGTTCCAGTTGCTGCTCAAGATCAGAGCTCAGATGATGCTGCACTTGCTGCTCAAGATCACAGCTCAAATGATGATGCAGTTGCTGCTGAAATGGAGTCGTCAGAAAACAACAATGCCGCCTCAGACTGGGGTGATGGCTGGGTAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36458.p1 GENE.R_Transcript_36458~~R_Transcript_36458.p1 ORF type:complete len:566 (+),score=137.16,zf-CCCH|PF00642.20|1.5e-09,zf-CCCH|PF00642.20|4.9e-07,zf-CCCH|PF00642.20|1.6e-07,zf-CCCH|PF00642.20|3.2e-07,zf-CCCH|PF00642.20|9.7e-06,zf-CCCH|PF00642.20|7.3e-06 R_Transcript_36458:198-1895(+)
MGTCEESNPSLETQDHETPNLELMNGGSHLHNIVVEQEQQHDDDDVDVDNEDDDHENHDGHQEEEEGVTVELDSLQLEGNDNGNIEEEKQEEKGEKKEDEETQNYPLRPNAVDCTFYLKTGTCKFGLNCRFNHPPKRIFQAVVGDKEKGTEESNGMEVPDTGKIDCKYFSTPGGCKYGDACRYNHSEEKVEAKTLELNFLGLPIRPLAKECSFYLRNGTCGYGTNCRFNHPDPTVAKESEPGHVLANGDSLRGVSNLPKTYESLHPSGVSQTQSNLPPFSNGMNMGNSLPYATGMSSYPHGMSQTRGWNQNQFSMSSANMPPLPHQMLNNFSKKTDPSPHHEYLMQIEEFPERPGQPDCDYFMKTGDCKYRSACKYNHPMSRAPKLRLPPLSVKGSYSRSAAGLPVQTTELSNSNPNGVPSTHHQQQMQNGEFPERPGQPECEYYMKTGNCKFRSACRYHHPRNRVSTTSTASSLNGKGLPLRPGSRICRNYEQQGTCGYGHKCLFHHPDDISLPAVPVAAQDQSSDDAALAAQDHSSNDDAVAAEMESSENNNAASDWGDGWVM*

Click here to download the sequence:
Link to NCBI Protein BLAST