Transcript Information: R_Transcript_3646.p1


Annotated TAIR IDAT1G53750.1
Annotated Gene Nameregulatory particle triple-A 1A
Annotated Gene Symbol(s)RPT1A
Annotation TypeOrtholog
Chromosome Positionchr1:20065921-20068324 | Reverse length=426
E-Value6.5e-310
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1223.43847051596
Replicate 2198.75186483063
Replicate 3227.08248300823
Condition 2: 8 Hour
Replicate 1182.64046804912
Replicate 2201.03846695155
Replicate 3235.12074553012
Condition 3: 24 Hour
Replicate 1241.19138928216
Replicate 2226.28592318412
Replicate 3226.10460274919


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3646.p1 GENE.R_Transcript_3646~~R_Transcript_3646.p1 ORF type:complete len:427 (+),score=92.68,AAA|PF00004.25|1.1e-39,AAA|PF00004.25|3e+03 R_Transcript_3646:101-1381(+)
ATGGCGATAGAGCACGAAGATGAGCTTAAGGACGAGAAGAACCCTCGTCCTCTCGATGAGGACGATATCGCCCTTTTGAAAACTTACGGCTTGGGACCATACTCAACGAGCATTAAGAAAGCGGAGAAGGAGATTAAGGAAATGGCCAAGAAAGTAAACGACTTATGTGGAATCAAAGAATCTGATACTGGTTTAGCAGCTCCTAGCCAATGGGATCTAGTCTCTGATAAGCAAATGATGCAAGAGGAGCAAACTCTGCAGGTCGCTAGATGCACCAAGATAATCAATCCAAACACAGAAGATGCTAAATATGTGATTAATGTTAAGCAGATTGCAAAGTTTGTCGTTGGGCTGGGTGACAAAGTTTCTCCAACTGATATAGAAGAAGGCATGCGTGTTGGGGTTGATAGAAATAAATACCAGATTCAGATACCATTGCCACCAAAAATTGACCCCAGTGTTACAATGATGACAGTGGAAGAGAAACCAGATGTGACTTACAATGATGTAGGTGGATGCAAAGAACAGATTGAAAAGATGAGAGAAGTTGTTGAATTACCGATGCTTCATCCAGAGAAATTTGTGAAGCTAGGGATTGATCCTCCCAAGGGTGTCTTGTGTTACGGTCCTCCTGGAACAGGAAAAACTCTTTTAGCCAGAGCCGTGGCTAACCGAACTGACGCATGTTTTATCCGTGTTATTGGAAGTGAGCTTGTCCAGAAGTATGTTGGTGAGGGTGCTCGAATGGTTCGTGAACTATTTCAGATGGCAAGATCAAAAAAGGCCTGCATTGTATTCTTCGATGAAGTTGATGCCATAGGAGGTGCACGTTTTGATGACGGTGTTGGTGGAGACAATGAGGTACAGCGTACTATGCTTGAGATTGTCAATCAGCTTGATGGGTTCGATGCCCGTGGAAACATCAAAGTTCTTATGGCCACAAATAGGCCTGACACACTTGATCCTGCCCTTTTGCGTCCTGGGCGGTTGGACCGGAAGGTTGAGTTTGGCCTTCCAGATTTAGAGGGTAGGACTCAAATATTCAAGATCCATACAAGGACGATGAACTGTGAAAGGGATATTCGGTTTGAACTCCTTGCTCGCCTTTGCCCCAACTCAACAGGTGCTGATATAAGGAGTGTGTGCACTGAAGCTGGAATGTATGCAATCCGGGCTCGGAGGAAAACTGTGACGGAGAAGGACTTCCTTGATGCGGTAAACAAGGTCATCAAGGGATACCAGAAGTTCAGTGCAACTCCCAAGTACATGGTTTACAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3646.p1 GENE.R_Transcript_3646~~R_Transcript_3646.p1 ORF type:complete len:427 (+),score=92.68,AAA|PF00004.25|1.1e-39,AAA|PF00004.25|3e+03 R_Transcript_3646:101-1381(+)
MAIEHEDELKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQTLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN*

Click here to download the sequence:
Link to NCBI Protein BLAST