Transcript Information: R_Transcript_36460.p1


Annotated TAIR IDAT1G72220.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27184388-27185629 | Reverse length=413
E-Value3.2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.952772412632
Replicate 220.607480038219
Replicate 326.966926535153
Condition 2: 8 Hour
Replicate 114.315809929474
Replicate 221.473545260186
Replicate 323.817986422518
Condition 3: 24 Hour
Replicate 113.54389156555
Replicate 211.669449148454
Replicate 315.518266815049


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_36460.p1 GENE.R_Transcript_36460~~R_Transcript_36460.p1 ORF type:complete len:378 (+),score=17.90,zf-RING_2|PF13639.2|4.1e-13,zf-RING_11|PF17123.1|2e-10,zf-RING_11|PF17123.1|4.5e+03,zf-rbx1|PF12678.3|2.4e-07,zf-C3HC4|PF00097.21|1.9e-06 R_Transcript_36460:501-1634(+)
ATGCCTGGCCAGAGCAACTGCTATGGCACATCTATCACCTTATTGGGCCTGAGCCTGCTGGTTTTATTTCCAACGATTGTTATGGCCCAGCAGCAAACACCTCCGGGAGAAACACCAGGAGGAAGTTACAGCGCACCCATGGCAACGGTGCTTATCGTTTTGATTGTTGTCTTTTTCTTGGTGGGCCTCGTTTCTATCTACCTCAGGCACTTTGCATGGTGCCTAGGATACGAAACTCCAGGCGGCGGTGGCGGCGGCGCGTGGAGAAGACAGGAGGCGCGTGGGCTTGACCCTGCAATACTCGAGTCATTCCCAACCTTCCTGTACTCCGACGTTAAACAGCACCGTATAGGCAAAGGCCCGCTAGAATGCGCCGTGTGCATAAACGAGTTCGAGGATGACGAGATTTTGCGGCTCTTACCTGGATGCAGCCACGTGTTCCATCCTGATTGCATCAGACCCTGGCTGTCCTCCCACGTCACTTGCCCCGTATGCAGGGCAAACCTGGAAGATCAACACAACAGTCAGTTTGATTCAGTGTTACAACAGCTCAACCACCAACCATCTGAAGAAGAATCAGAACCGTCCATTCATCAAATCAACGATGAAGTAATCTTTGGGATTAGACCATCGCCTGACGTCATCAAGAGTCCAGTCCAGGAGATTAAAGCTGGGGGTGCTCGTATGGGAAAATTGCCAAGGTCACATTCAACGGGGCATTCATTAATTGATGATTGTGAGAGGTTCACACTAAGGTTACCCGAAGAGGTACGCAACAAATTGGTAAATACCACTCCGAATTTTTGTACTTTGCCTTCTATGGTTAGTCCCAGAATTGGGTTCCGGGCTAGGAGTGTTGGGTGCACAGGTATGCCAATCAAACCGGACCGATGGCGGTTTTCTGTGAGTCCACCATTTATATCTAAACCCGGTTCAACATTGTCATCTAAATCTGATGGTGGTGGTAACATTACTCCTCAGACCGGGATCATGAGCGGTCCAAGGAATTTATTAAAGTCGATTAAATCGCCACTGAATCCAGTTAGTCGTACAAGTGACATAGGTGAAAGATCATCGGATAGACTTTGGCCAAGCCGGCCGTCTCAATACTTGGAATTGGAAACTCAACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_36460.p1 GENE.R_Transcript_36460~~R_Transcript_36460.p1 ORF type:complete len:378 (+),score=17.90,zf-RING_2|PF13639.2|4.1e-13,zf-RING_11|PF17123.1|2e-10,zf-RING_11|PF17123.1|4.5e+03,zf-rbx1|PF12678.3|2.4e-07,zf-C3HC4|PF00097.21|1.9e-06 R_Transcript_36460:501-1634(+)
MPGQSNCYGTSITLLGLSLLVLFPTIVMAQQQTPPGETPGGSYSAPMATVLIVLIVVFFLVGLVSIYLRHFAWCLGYETPGGGGGGAWRRQEARGLDPAILESFPTFLYSDVKQHRIGKGPLECAVCINEFEDDEILRLLPGCSHVFHPDCIRPWLSSHVTCPVCRANLEDQHNSQFDSVLQQLNHQPSEEESEPSIHQINDEVIFGIRPSPDVIKSPVQEIKAGGARMGKLPRSHSTGHSLIDDCERFTLRLPEEVRNKLVNTTPNFCTLPSMVSPRIGFRARSVGCTGMPIKPDRWRFSVSPPFISKPGSTLSSKSDGGGNITPQTGIMSGPRNLLKSIKSPLNPVSRTSDIGERSSDRLWPSRPSQYLELETQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST